Coregonus clupeaformis (lake whitefish): 121551884
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Entry
121551884 CDS
T08357
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121551884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121551884
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Serotonin (5-HT3)
121551884
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121551884
NCBI-ProteinID:
XP_045061120
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Position
19:58448670..58492005
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AA seq
442 aa
AA seq
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MRPMDHSKLKCCLFSLLLLTVSAADPLSNAATSSSAATSSSATTPSCTTRRCLASMLIAK
EALSQPQSPSCISNISVPSIVYETLSVDTKNLRFESRLQVMLSWEDPDLSWDTSVYHHDM
VVLPVRKIWTPELHVTNGVQTTMKHGNKDLLVHSNGTIEHMVIMNTVVGCEVNLYNYPFA
SDFCPIAINVWALRGCGMFLNFGAVSKTSTNRGDWLTENVELTAKGGRDDRNYLWVSLKM
RSETPFLSLVLPSILIIVADVVSFALPLGGGERISFKVTLVLSFIMFLIILKDLLPEGGQ
CSPIIRKHFCFCLVILVLSMLQSMVLTRLAKCGTLWPCSLSKSKDSPLKDTDNEEESRPD
ITVIKLKASEEEKNSPLQKVVKFLNKMAAQDQKEVRHHRFANKVDLICFCIYLTILIVYT
AAILYFSFGSRCEINQLEFWEN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagacccatggaccacagcaagctgaaatgttgtctcttctccctactcttgttaaca
gtatctgcagcagaccctctatccaatgcagccacttcatcaagtgcagccacttcatcc
agtgcaaccacaccatcctgtacgacacgtcgatgtctggccagcatgctgattgcgaaa
gaagctctgagtcagccacagtctccatcatgcatctcaaatatcagtgtgccgtcaata
gtgtacgaaactctgtctgttgacacaaaaaaccttcgctttgagagtcgtctgcaagtc
atgctgtcttgggaagaccctgacttatcatgggacacatcagtctatcatcatgatatg
gtggtcctgcctgtcagaaaaatctggactcctgaactccatgtgactaatggagtgcaa
acaacgatgaagcacggcaacaaggatttgctggtgcacagcaacgggactatagagcac
atggtcatcatgaatactgtggtgggctgtgaggtcaatctgtacaattaccccttcgct
tcagatttctgccccatcgccatcaatgtgtgggcacttagaggatgtggtatgttcctg
aactttggggctgtgagcaagactagcacaaaccgcggggattggcttaccgagaacgtg
gaactcactgctaaaggaggcagagatgatcgcaactatctatgggtgtcgctgaaaatg
cggtccgaaaccccgtttctgtccctggtcctgcccagtatactgatcattgtggctgat
gtggtgagctttgccctgccgctgggagggggtgagcgtatctccttcaaggttacactg
gttctcagcttcatcatgttcctcatcatcctcaaggatcttctgcctgaaggaggccag
tgcagccccatcatccgaaagcacttctgtttctgtttggtcatcctggtgttgagcatg
ttgcagtctatggtgctcacacgtctggctaagtgtggcactctctggccctgcagcctc
tccaagtccaaagactcaccgcttaaagacacagacaatgaagaggaatccaggcctgat
attactgtcatcaaactgaaagcctcagaggaagagaagaattcacccctccagaaggtg
gtgaagtttctcaacaaaatggctgcacaagaccagaaagaagttagacaccatcgcttt
gccaacaaagtagacttgatctgtttctgtatctatctcaccatcctcattgtttataca
gccgccattttatatttctcctttggttctcgatgtgagatcaaccaattagaattctgg
gagaactaa
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