Coregonus clupeaformis (lake whitefish): 121551886
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Entry
121551886 CDS
T08357
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121551886
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121551886
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121551886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
121551886
NCBI-ProteinID:
XP_045061017
LinkDB
All DBs
Position
19:complement(58545016..58551655)
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AA seq
612 aa
AA seq
DB search
METLIIKNEENTEESHPTTGSQDVTTSVINVWDLNLNQNQEQGDPTRTDDKPGENTQPQN
QEQGDPTRTDDKPGENTQPQNQEQGDPTRTGDKPRENTQTQTVSSGFTVTTEDVLCDSCI
EIPCRAQKSCLTCLVSYCEAHLRPHLENQRFQNHRLVEPLQDIECLTCEEHRLPLELYCL
TDGCGVCVCCECEGQGHLGHSTVSVEEARRQIETELQKKQGEIMKTVSVAENAIGKLQSN
TSSIESSVAGVRAVMEQQFSLLRGAVEEVRRGATEVLEGEQRQALSQAEGIQTHLEQKSL
ELKKTLARVERLFRNKTDVDFLQEYSEWKTGAVDVCLPEVCIGLTDRLASFSCLLTESTQ
ELCDQLKATYRNKLKDICKTEKLGITTMVHPKMPEPETRDDFLKHASSLTFDPDTVHKFL
RLTEDNRKVTNTTPWQHSYPDMPERFEYWRQVMTSESLYLGRHYFEAELSGEGVHVGLTY
KSIDRKGVESGSCITGNYFSWSLGREGRSFSTWHADMEAVVEATRVFTRIAVYIDFDSGS
LAFYGVTDAAMTLLYRYKAEFMEPLYPTVWLSKKDNVVLLIGPKDPPLMKSSTLPATPIT
LIATSAPVTPES
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctcatcatcaagaatgaagagaatacagaagagagtcatcccacaactgga
agccaagatgtcaccacatccgtgataaacgtgtgggacctgaacctaaaccagaaccag
gaacaaggggacccaacaagaacagacgataagccaggggagaacacccagcctcagaac
caggaacaaggggacccaacaagaacagacgataagccaggggagaacacccagcctcag
aaccaggaacaaggggacccaacaagaaccggcgataagccaagggagaacacccagacc
cagacagtctctagcgggtttactgtcaccacagaggatgtgctgtgtgactcctgcatc
gagatcccgtgccgggcccagaagtcctgcctcacctgcctggtgtcgtactgcgaggcc
cacctcagaccccacctggagaaccagaggttccagaaccaccgactggtggagccctta
caggacatcgaatgtctcacctgcgaggagcaccggctaccgcttgaactgtactgcctg
acggacggctgtggtgtgtgtgtgtgctgcgagtgtgagggacaggggcatctggggcac
agtactgtatctgtagaggaggctcgaagacagatcgagacagagctgcagaagaaacaa
ggggagattatgaagaccgtctcagttgcggagaatgccattggcaagctacagagcaac
acttcatccatagagagctctgtggcaggggtacgtgctgtgatggagcagcagttctcc
ctgctgcggggggctgtggaagaggtccggaggggggccacagaggttctggagggggaa
cagaggcaggcgctcagccaggccgagggcatccagacccacctggagcagaagagccta
gagctgaagaagaccctggccagagtggaaagactcttcaggaacaagacggacgtggac
ttcctgcaggaatactcagagtggaagacgggggcagtggatgtctgtctgcctgaggtc
tgcattggcctcacagatcgcctggcctccttcagctgcctgctcactgagtccacccag
gaactgtgtgaccagctcaaagctacctacaggaacaaactgaaggacatctgcaagact
gagaaactgggcattacaaccatggtccatcccaagatgcctgagcctgagacgcgagat
gacttcctcaagcatgccagcagtctgacctttgacccagacactgtccacaagttcctg
agactaacggaagacaacaggaaggtgaccaacaccacgccctggcagcacagctaccca
gacatgcccgaacgcttcgagtactggcgtcaggtgatgacctcagagagcctctacctg
ggccgacactactttgaggcagagctgagcggggagggcgtgcacgtgggactcacctac
aagagcatcgaccggaaaggcgtggagagcggcagctgcatcacaggaaattacttctcg
tggagcctcggaagggaggggcggagcttttccacttggcatgctgatatggaggctgtc
gtggaagccacaagagtgttcacaaggattgccgtctacattgactttgactcaggctca
ttagctttctatggtgtgactgacgccgctatgacactcctctacaggtacaaggctgag
ttcatggagcccttgtatcctactgtctggctctcaaagaaggacaatgtggtgttattg
atcggccctaaggaccccccactaatgaagagctcaactctgcctgccacccccatcact
ctcatagcaacatccgctcctgtcactccggaatcataa
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