Coregonus clupeaformis (lake whitefish): 121551907
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Entry
121551907 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: mast/stem cell growth factor receptor kita
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121551907
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121551907
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121551907
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121551907
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121551907
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121551907
CD molecules [BR:
cclu04090
]
Proteins
121551907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
VEGFR1-3_N_Ig-like
V-set
C2-set_2
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
121551907
NCBI-ProteinID:
XP_045074861
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MGDNWILIIMPFLLCPLTGWSNPVITPSGPHLVVPKGGALELRCHDNTNADANTPSTVVS
GGVRWQRERGRRLEGEVEEGGGVVFIRVQSAQGYHMGRYTCINNNTKERSSIYVFVKDPQ
SPFQRSMVNGILVRVGEDLTLPCLVTDPDVTLVTLQTCDLHPVPSDLHYXTDPQRGVVIG
NARKEYEGCYVCVGELGGATVRSSQYTVDIRLVPEQPPVISLSQRERVILRRGEQFEITC
RSSNLNPDFSIKWDFPVGARAFQDHASHILSGSRGYQRSASLSIASVNQSDAGAYRCHAH
NERAPRRYPAAGLCLFPPERGFISMLGDSRPSQFAVREGESLSLRVELESYPRPGTLSWA
YNGKTLRNTTEHVITVHRHRYRYISELRLVRVHGSEGGIYTFLANHEDASVNQSFPVYVN
SKPVIISQEGPVDGQVRCVAAGYPAPKISWFYCELPHTRCSHLTNATQWEQQEVATVTVS
DSAFGSSEVESRLNVTKGDTHTHYHTLECVATVQGEQAYTLFSISERTVAHKLFTPLLTG
VVVTSVILSIILVVLLYKYLQKPKFQIQWKVIDSIHGNNYIYIDPTQLPYDPKWEFPRQK
LRFGKILGSGAFGKVVRATAYGLCSADSVTTVAVKMLKPSAHSTEKEALMSELKVLSYLG
NHVNIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRETFFSAQAADGYYRNINNHREP
QRDGNGNGYMPMRTSEKDRTSSQSDDKGCLSIDDLSVDTDDLLSFSYQVAKGMEYITSKN
CIHRDLAARNILLTQGRVAKICDFGLARDITTDSNYVLRGNARLPVKWMSPESIFDCVYT
LESDVWSYGILLWEIFSLGSSPYPGMQVGSAFYRMIQEGHRMNRPEVAPREIYDMMLSCW
SEDPLKRPSFRKLVERTELLLSENTKNVYLNLSYGAVPPDQQRAASQRLSSVCSTTAPTQ
PLLLSTADVFLDYDTV
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaactggatcctaattatcatgccgtttctgttgtgtccgctgacgggctgg
tctaatcccgtcatcaccccgagtggacctcacctggtggttccgaaaggcggggctctg
gaactccgctgccatgacaacaccaacgctgacgccaacactccatcaactgttgtctca
gggggggtgaggtggcagagagagagggggaggaggctggagggggaggtagaggaggga
ggaggggtagtgtttattagggtgcagtctgcccagggatatcacatgggacgatacacc
tgcatcaacaacaacaccaaggaacgctcctccatttacgtctttgtgaaagacccccag
agtccgttccagcgttctatggtgaatggcattctggtccgcgtcggggaggacctgact
ttaccatgcctggtcaccgaccctgatgtgaccctcgtgaccttacagacctgtgactta
catcctgtaccctccgacctccattacnncaccgacccccagcgcggcgtcgtcatcggt
aatgccaggaaggagtacgagggttgctacgtatgcgtgggcgagctgggaggagccacc
gtgaggtcgagccagtatactgtggacatacggctagtccctgagcagcctccagtgatc
agtctgtcccagagagagagggtgatcctgaggagaggagagcagtttgagatcacctgc
agatcctcaaacctcaaccctgacttcagcattaagtgggacttccctgttggagcacgt
gccttccaggaccacgcctcccacatcctgtctggttcccgtggataccaacgctccgcc
tccctctcgatcgcctctgtcaaccaatcagacgccggggcataccgatgccacgcccac
aatgagagggcgccacgccgataccctgcagctggattgtgtttgttccctccagagcga
ggcttcatcagtatgctgggtgactcccggcctagccagtttgctgtcagagaaggggag
agcctaagcctcagggtagagttggagtcctaccccagacctggcactctgtcctgggct
tacaacggcaagaccctccgcaacaccacggagcacgtcatcactgtccatcgacacaga
tacaggtacatcagtgagctgcggttggtgagggtccatgggtcagagggcgggatctac
accttcctagccaatcatgaggacgcctctgtcaatcaatcattccctgtctatgtgaac
agtaagcccgtcatcatttcccaggagggaccagttgatggacaggtgcgctgcgttgcc
gccggttacccggcccctaaaatcagctggttctactgtgaactgccccacacacggtgt
tcccacctgaccaacgccacccaatgggagcagcaggaggttgccacggtaacggtatca
gactcggccttcggcagcagcgaggtggagagccgactgaacgtcacgaagggagacaca
cacacacactaccacacgttggagtgtgtggccaccgtgcagggcgagcaggcttacaca
ctgttctccatcagcgagcgcaccgtggcccataagctcttcacccctctgctgactggt
gtggttgttacatctgtaatactgagcatcatactggtggttctcctctacaaatacctt
cagaagcccaagttccagatccagtggaaggtgattgacagtatccacggcaacaactac
atctacatcgatcccacccagcttccctacgaccccaagtgggagttccccaggcagaag
ctacgctttggtaagatcctgggttcgggggcctttggtaaggtggtgagagccacagcc
tacggactgtgttctgctgactccgtcacgactgtcgctgtcaagatgctcaaaccgagc
gcccactccaccgagaaggaggctctgatgtcggagttgaaggttctcagttacctaggc
aaccatgtcaacatcgtcaacctgctgggagcttgcactgtgggagggccgacgctggtg
atcacagagtactgttgctatggagatctgctcaacttcttgcgtaggaagagagagacg
ttcttcagcgcccaggcagctgatgggtactaccgcaacatcaacaaccaccgagaacca
cagagagatgggaacggtaacggttacatgcctatgcgtacgtctgagaaagacagaacg
tcctcccagtcagatgataaggggtgtctgagtatagatgacttgtcggtggacacagat
gatctactgagcttctcctaccaggtggctaagggaatggagtacatcacctccaagaat
tgtatccacagagacctagcagccaggaacattctgctgacccagggtagagtagctaag
atctgtgacttcggactggcccgagacatcacaaccgactctaactacgtcctcagaggc
aatgcccgtctcccagtgaagtggatgtctccagagagtatctttgactgtgtttacacc
ttggagagtgatgtctggtcatacggtatcctgctctgggaaatattctctttaggtagc
agtccgtatcctggtatgcaggtgggttcagcgttctacaggatgatccaggaaggacac
aggatgaacagacctgaggtggctcccagagaaatttatgacatgatgttgtcttgttgg
agtgaggatcctctgaagagaccttcctttaggaaactagtagagaggaccgaactactg
ctgtcagaaaacaccaagaacgtgtacctgaacctgagctacggagctgttcctccagac
cagcagagggcagcgtctcagagactgagctcagtgtgcagcactacagccccgacacaa
ccactactgctgagtactgctgacgtgtttctggactacgacactgtctga
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