Coregonus clupeaformis (lake whitefish): 121551917
Help
Entry
121551917 CDS
T08357
Name
(RefSeq) myotubularin-related protein 3 isoform X1
KO
K18082
myotubularin-related protein 3/4 [EC:
3.1.3.48
3.1.3.64
3.1.3.95
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00562
Inositol phosphate metabolism
cclu01100
Metabolic pathways
cclu04070
Phosphatidylinositol signaling system
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121551917
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
121551917
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121551917
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121551917
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121551917
3.1.3.64 phosphatidylinositol-3-phosphatase
121551917
3.1.3.95 phosphatidylinositol-3,5-bisphosphate 3-phosphatase
121551917
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Myotubularins
121551917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myotub-related
FYVE
DSPc
Y_phosphatase3
Y_phosphatase
CTD11
TAF4
Motif
Other DBs
NCBI-GeneID:
121551917
NCBI-ProteinID:
XP_041720528
LinkDB
All DBs
Position
18:55179393..55202004
Genome browser
AA seq
1289 aa
AA seq
DB search
MCSLSSDSHSFTGAMEEEGQESMECIQANQIFPKKPPVLEEESLQVPFPELHGESTEYVG
RAEDAIIAMSRYRLHIKFKESIVNSESCCEVSVPLQLIETVECRDMFQLHVTCKDCKVVR
CQFSTLEQCQVWLKRLSAAVRPPSRLDDLFSFAFHAWCVDVYAGEKEQLGELCRPGEHVT
SWFKNEVERMGFDTQNAWRISDINSKFRLCSSYPQQLLVPAWITDKELENVAAFRSWKRF
PTVVFRHQSTGAVIARCGQPEVSWWGWRNADDEHLVQSIAKACAVDGSSRKHLANGSYTN
GTNGTNGIISTNDLVDTDFESSLTNSSEVETLAIQPQKLLILDARSYAAAVANRAKGGGC
ECPEYYPNCEVVFMGMANIHSIRKSFQSLRFLCTQMPDPANWLSALESTKWLQHLSLLLK
AALLVVNAVDRDHRPVLVHCSDGWDRTPQIAALSKLLLDPYYRTIEGFQVLVETEWLDFG
HKFADRCGHGENSEDLNERCPVFLQWLDCVHQLQRQFPCSFEFNEAFLVKMVQHSYSCLF
GTFLCNSGKEREERHVRERTCSVWSLLRPANRALRNMLYSSHSETVLHPVCHVRNLLLWT
AVYLPSSSPSTPSDESCAPYPVPGANPEDTPLGRHPKTRSFDNLPSACELGSSLAPNRRS
SDPSLNEKWQDHRRSLELNIAVGPDGGGAQEQDGWANGQSGAAGPQAGMADSELEDSPEG
QQTELRDGAAKGSLAVGEEIELSIELSVAVAEGQMENILQEATKEEAGAETQREANATAA
AAVAQTLIDANANGTETEKEAMASNAETDKEANTNGAETTITNGHHPGNGTDEPEEESGV
SPASPPLPTDVSTDVPEEQEALERRESEELVEQVLENCTAQEEPEHNPTPSPAQPSPRTL
TNGFGERTPEEPETAVNHLPPEPESSRHLSEALVQADKRASLMESSTETLTEEACSRPEA
PVQAPVCPGPQPCTEGRSQPSCHRRVNGEAEPEQGASRTLNGGHKRPSVSAFQSLSAEPS
REGLCNGESSEGEPCGGPHWAKVNGERAPLSRQVSLASCSSLTLHRRGSCSQHRCLHALL
GRRAATPSPEQPARSHLDDDGLTLHMDTIQQRLRQIEAGHQMEVEMLKKQVQELWSRLES
HHHAASLRINGDMGDEVTSMTDSEYNLDANCLSRCSTELFSEASWEQVDKNDTEVTRWYP
DHLAALCYGCESRFWLATRKHHCSDREPVQEAWNCGNVFCASCCDQKIPVPSQQLFEPTR
VCKTCYGSLQINTAPNPMELEEPIRASSN
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtgttccttgtccagtgactcccactccttcacaggggccatggaggaggaggggcag
gagagcatggaatgtatccaggccaatcagatcttccccaagaagcccccagtcctggaa
gaggagagcctgcaggtgccctttcctgagctgcatggcgagtcaacagagtatgtgggt
agagcggaggatgccatcatcgccatgtccagataccgcctccacatcaagttcaaagag
tccatcgtcaacagtgagagttgttgtgaggtgtcagtccctctgcagctcatagagact
gtggagtgtcgtgacatgttccagctccatgtcacctgcaaggactgtaaggtcgtcagg
tgtcagttctccacattggagcagtgtcaggtgtggctgaagcggctgagcgctgcggtc
cgccctccgtcccgcctggatgacctcttctccttcgccttccatgcctggtgtgtggac
gtgtacgccggggagaaggagcagcttggggagctgtgcaggccaggagagcatgtgacc
tcctggttcaagaacgaggtggagaggatgggctttgacactcaaaacgcctggaggata
tccgacatcaacagcaagttcaggctgtgctccagctatccgcagcagctcctggtgcca
gcctggatcacagacaaggagctagagaacgtggcagccttccgctcctggaagaggttc
ccgactgtggtgttcaggcaccagagcacgggggctgtgatcgcccgctgcggccagccg
gaggtcagctggtggggctggaggaatgcggacgacgagcacctggtccagtccatcgcc
aaggcctgtgctgtagatggcagctcccgcaaacacctggccaacggatcctacacaaac
ggaaccaacggaaccaatggaatcatcagcaccaatgacctcgtcgacaccgacttcgaa
tcgtccctgacgaacagctcggaggtagagacgctggccatccagccacagaaactgctg
atcctggatgccaggtcctatgcagccgctgtggccaacagagccaagggagggggatgt
gaatgcccagagtactaccccaactgtgaggtggtgttcatgggcatggccaacatccac
tccatccgcaagagtttccagtccctgcgcttcctctgcacgcagatgcccgacccggcc
aactggctgtctgctctggagagcaccaagtggctgcagcacctgtctctgctgctgaag
gcggccctgctggtggtgaacgctgtggaccgcgaccacagacccgttttggtgcactgc
tctgacggatgggaccgcacgccccagatcgcagccctgtccaagctgctgctggaccca
tactaccgcaccatcgagggtttccaggtgctggtggagactgagtggctggactttggc
cataagtttgctgaccgctgtggccacggggagaattcggaggacctgaacgagcgctgc
ccggtcttcctgcagtggctggactgtgtgcaccagctgcagaggcagttcccatgctct
tttgagtttaacgaggcgttcctggtgaagatggtgcagcactcctactcctgtttgttt
ggcaccttcctgtgcaacagtgggaaggagagggaggaaaggcacgttcgggagaggact
tgctccgtgtggtcactgctgcgaccagccaaccgcgctttgaggaacatgctctactcc
tcccactccgagactgtgctccaccctgtgtgtcacgtgcgtaacctgttgctgtggaca
gcagtctacctgcccagctcctccccctccaccccctctgatgagtcgtgtgcaccctat
cctgtgccaggtgccaacccagaggacacgcccctgggcagacatccgaagacccgttcc
ttcgataacttgcccagcgcgtgtgagctggggagctcgctggcccccaaccggcgctcc
agtgacccgagcctgaatgagaagtggcaggaccaccggcgctctctggagctcaacatc
gctgtggggcccgacggggggggagctcaggagcaagatgggtgggctaacggccagtct
ggagcagcagggcctcaggcaggcatggccgactctgagctggaggacagccctgaaggc
cagcagactgagctgagagacggagccgccaaggggtcattagcagtaggagaagagata
gagctctccattgagctgtctgtggctgtggcagagggacagatggagaacattctccag
gaggcaacgaaggaggaggctggtgccgagactcagagagaggctaacgctactgctgct
gctgccgtggctcaaactctgatcgacgctaacgctaatggaacagagacagagaaagag
gccatggcaagtaatgctgagactgataaagaagctaacaccaatggggctgagactact
atcactaatggtcatcacccagggaatggcacagatgagcctgaggaggagtctggtgtc
tctccagccagtcccccccttcccactgatgtgtccacagacgttccagaggagcaggag
gccctagagaggcgggagtcagaggagctggtagagcaggttctggagaactgtactgcc
caagaggagccagaacacaaccctacccccagcccagcccagccatcccctagaactttg
accaatggctttggagagaggacaccagaagagccagagacggctgtgaatcacctccca
ccagagccagagtccagcagacacctctcagaggccctggtgcaggctgacaagagggct
tccctcatggagagttccacagagactctgactgaagaggcctgcagcaggccagaggcc
ccagtgcaggcacctgtctgcccaggcccccagccctgcactgaaggcaggagccaaccc
tcctgccacaggagagtgaacggggaggcagagccagagcagggggcatccaggacttta
aatggaggacacaagcggccctccgtcagtgccttccagtctttgagtgctgagcccagc
agggagggtctatgtaatggtgagagctcagagggggagccctgcggtggccctcactgg
gccaaggtgaatggggagcgggccccactgagccgccaggtctccctggcctcctgcagc
tccctgaccctccatcgccggggcagctgctcccagcaccgctgcctccatgccctactg
gggcgccgcgccgccacacccagccccgagcagccggcccgcagccatctggacgacgac
gggctgacgctccacatggacactatccagcagcggctgaggcagatcgaggcaggccac
cagatggaggtggagatgctgaagaagcaggtgcaggagctgtggagccgcctggagagc
catcaccacgcagcgtccctcaggatcaacggagacatgggagacgaagtgacctcaatg
acagactcggagtataacctggacgctaactgcctctcacgctgcagcacagagctcttc
tccgaggctagctgggagcaggtggacaagaatgacacagaggtgacccgctggtacccg
gaccacttggcagccctgtgctacgggtgtgagagtaggttctggctcgccaccaggaag
catcactgcagtgacagagagcctgtccaagaggcctggaactgtgggaatgtattctgt
gccagctgctgcgaccagaagatccctgtgccaagccagcagctgtttgagcccacccgt
gtgtgtaagacctgctatggcagcctccagatcaatacagctcccaatcccatggagctg
gaggaacccatcagagccagctcaaactaa
DBGET
integrated database retrieval system
