Coregonus clupeaformis (lake whitefish): 121551928
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Entry
121551928 CDS
T08357
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121551928 (adamts13)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
121551928 (adamts13)
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121551928 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Reprolysin_4
Reprolysin_5
TSP1_spondin
Reprolysin_2
TSP1_CCN
Peptidase_M10
DUF6055
Motif
Other DBs
NCBI-GeneID:
121551928
NCBI-ProteinID:
XP_041720543
LinkDB
All DBs
Position
18:complement(57763251..57779542)
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AA seq
1555 aa
AA seq
DB search
MTALALLCLLSVLPGSTATLMRSPLEELFLHSLEQKDMVFYFGTASASSVPEFQLIWTDC
ASTELHTGPWRCSFEAQGKRFVLGPGERKQSLFCQSTLETARNTTLNVIRKSHAMCCQQA
KVLHPPSTKGFLTICARKMQGLVVAGKEKERLYIQSVLQKHIHLTEARNCSSPGTPHLVF
HQPFTAGGPPRHSPMKRLRRRRSTIMPEMTHLELLVVVAPDVQLVHRQDTERYILTNLNI
ASELLRDMTLGANMRVHLVRMIILSEPEPEINISTNISLSLRSVCEWARRVIPSNDTDPL
HADLVLYITRFDLELPNGNKQVRGVAQLGGACSSQWSCVITEDTGFDLGITIAHEIGHSF
GINHDGIGNTCSSSGFMMASDGGYNSVDLTWSQCSRQQLYTFFSEGKADCVKDLPVLVGS
LQDWKPGLYYGVDDQCRIAFGSTARACSFTNTDLPVCRVLSCHIKPDDNSSCKRLLVPLL
DGTECAPNQWCLKGRCVSPDQLSSSSSVVVHGSWSSWSQFSPCSRTCGGGVTSRTRQCNN
PRPAFGGNDCKGRDTEAELCHQQQCERTQLAFMAEQCSQTDLQPLYLSPNTASLYTWIPA
VGFVTGDEQCRYMCQCKGENFIVSRGSQFVDGTRCESDSPAPLGATTACLGGTCQLFGCD
GVLKSGKVEDVCGVCGGDGSSCSLTSQSYSGGRAREYVTFLTLPVNATQVHIVNRAPVFT
HLAVLIGKQYVVSGSGSIALNITHPSPLEDGRWVYRLYLTPDLLPLMEELLLPGTVTEET
HIQVYRKYGKEYGEQTSPNITYHFYTPISNNAFIKEIPRGKWTVVTTSCSVTCSSGIQKS
MYVCMDEDTKEHLEEVYCDSVPLLLPQQTTCHLPACPPSWEMGEFRPCSALCGGGEKVRP
VRCVQRQGADVLQVPVSECPQHSAPQSVDTCNFQPCPARWNASEAGECSAVCGPGVAKRV
VTCVRSEGGHDVEVDHSLCSGLFKPPVLVSCVVDVCPIGWESKGQDQPILNKSPGLRQRS
RYLTVYVWSPVIGQCSKTCRNGTLQVWFSCVDHQTRLGVPEVHCDAFSKPEPHTESCNPF
PCPPMWRYKQGVCSVSCGGGVAHRVLYCSQETEGDEEVVVNNTECSSMTKPIAVVRCNSN
SCPARWRVLRTGACSTSCDLGVARRHVSCVEYIHGEDSEVSEERCHAAVKPATTVPCLVQ
VCTFRWDVKDWNQCSVPCGYGIQSRAVSCMGPTKPEPLSPLFCMHMPKPITIRGCQMDDC
RVLEKTSPLTYTHTTNAPSLETRDQLTSSQGMEVTPMDEEPLLSPTLSLTQTPPTATELT
TPQTTTAMPSVTPKTSLCGQLLLEESGTVDLRHETGRCILSIGRPLDEVIHMKVVFSSLS
CKKREYVAFYDRLVLVRKCDQLEDTELTSRTNVLLVRQNLLSPGNGVLLTYSSQKNTKKS
HHQDCDVQLFAPSGVIENPTMTSVLGSHTCRVLINAPPSVKIRIRALSMGPVVNSTATQS
TFIMIQDVDVLKTNVFKGQQLFDWRSAGNMAEIEFHGEYLHSNGSFRAEYSFVEP
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgacagccttggcgctgctctgtctgctgtcagtgctgccaggctccacagcaacacta
atgagatctccattggaggagctatttctgcactccctggaacaaaaggacatggtgttt
tattttggtactgcctctgcttcctcagtgcctgagtttcagctcatctggacagactgt
gcctccacggagctccacactggcccctggcgatgctccttcgaggcccaagggaagcgc
tttgtgttggggcccggggagaggaagcagtccctcttctgtcagtccacattagagaca
gctcggaacaccactctcaacgtcataaggaaaagtcatgccatgtgttgtcagcaggcc
aaagttctacatcctccttcaactaaaggatttctcaccatctgtgccaggaaaatgcaa
ggcctggttgttgcaggtaaagagaaggagagactatacattcagtcagtgcttcagaaa
cacattcatctgactgaagccagaaactgttccagtccaggaacacctcatctggtgttc
caccagccatttactgccggaggcccccccagacactctcccatgaagaggctgcgtcgc
cgacggtcaaccataatgcctgagatgacccacctggagctgctagtggtggtggcgcct
gatgtgcagctggtccacaggcaggacacagagagatacatcctcaccaacctcaacatt
gcctcagagctgctgagggacatgacactgggagccaacatgagagtgcatctggtccgc
atgatcatcctctcagaaccagagccagagattaacatctccaccaacatctccttgtct
ctgaggagtgtgtgtgagtgggccagaagggtcatcccctctaatgacacggaccccctg
catgctgatcttgtgttatacatcacaagattcgatctggagctgcccaatgggaacaag
caggtgaggggtgtggcccagctgggcggggcatgttctagccaatggagttgtgtgatc
acagaggacacaggctttgatctgggcatcaccatcgctcatgagataggccacagcttt
ggtataaaccatgatgggatcggtaacacatgcagcagcagtggctttatgatggcctct
gatggaggctacaacagtgtggatctcacctggtcccagtgcagcagacagcagctgtac
acattcttcagtgaaggcaaggctgactgtgtgaaagacttgcctgtcctggttggctct
ctgcaagactggaaaccaggcctttactatggagtggacgaccagtgccggatagcgttt
ggtagcaccgccagggcctgctccttcaccaacactgacctgcctgtgtgccgtgttctc
tcctgccacatcaaacctgatgacaacagctcatgtaaacgcctgctggtgcctctgttg
gatgggacagagtgtgcacccaaccagtggtgcctgaagggccgctgtgtgtccccagac
cagctcagctcctcttcctctgtggtggtgcacggctcctggtccagctggtcccagttc
tccccctgctcacggacatgtggtgggggcgtcacttcccggaccaggcaatgcaacaac
ccacgacctgcatttggtgggaatgattgcaagggcagggatacggaggctgaactttgt
caccagcagcagtgtgaaaggacccagctggccttcatggcagagcagtgctcccagaca
gatctccagcccctgtacttgtcccccaacacggcctccctctacacctggatccccgct
gtcggctttgtcacaggggatgaacagtgcaggtacatgtgccagtgtaaaggagagaac
ttcattgtgagccgtgggtctcagtttgtggatgggactcggtgtgaatcagacagtcca
gctcccctgggtgccacgacagcttgtctaggagggacgtgccagctgtttggctgtgat
ggagtgttgaagtctgggaaggtggaggatgtgtgtggggtgtgtggaggagatggctcc
tcttgcagtctcacctctcagtcttacagtggtggtcgggccagagagtacgtcacattt
ctgacactgccagtaaacgccactcaggttcacattgtcaacagggcacctgtcttcact
cacctggcggtgttgattgggaaacagtatgttgtgtctgggagtggcagcatagcgtta
aacatcactcacccctctcctctggaggacggtcgttgggtttatcgtctgtacctgacc
cctgacctcctgcctctaatggaggagctgctgctgcctggaactgttacagaggagaca
cacatacaggtctatcggaaatatggaaaagaatatggagaacaaaccagtccaaacatc
acctaccacttttatactcccattagtaataatgcttttataaaagagatacccaggggc
aagtggactgttgttacaacatcctgctctgtcacctgtagctctggcatacagaaatct
atgtatgtctgtatggatgaagacactaaggagcatctggaggaggtctactgtgattca
gttccccttctcctgcctcagcagacaacctgtcacctcccagcctgtccccccagctgg
gagatgggcgagtttagaccctgcagtgccttgtgtggtggtggagagaaagtgcgtcct
gtgagatgtgttcaaaggcaaggagcagatgtcctacaggtgccagtttctgaatgtcca
caacactcagccccacaatcagtggatacatgcaactttcaaccctgccctgcaaggtgg
aatgcgtcagaagctggggagtgttcagcagtgtgtgggcccggagtggccaaacgcgtt
gtgacatgtgtgcggtccgaaggtggtcatgatgttgaggtggaccatagcttgtgttca
gggctcttcaaaccacctgtcttagtgtcttgtgtggttgatgtctgccctattggctgg
gagtctaagggacaggatcaacctatacttaacaaatcccctggtttaaggcaacgctcc
aggtacctaacagtgtatgtttggagccctgtgataggccagtgctcaaagacctgcaga
aatggtaccctgcaggtgtggttttcatgtgtggaccaccagaccaggctaggggtgcct
gaggtccactgtgatgccttcagcaaaccagagcctcacacagagtcctgtaaccctttc
ccttgccctcccatgtggcgctacaagcagggagtgtgcagtgtgtcgtgtggaggaggc
gtggcccatagggtgctgtactgctcacaggagaccgagggagatgaggaggtggttgtg
aacaatacagagtgcagtagcatgaccaaacccatagcagtggtcagatgcaactccaac
agctgcccagccaggtggagagtgctgaggacgggggcctgttctacgtcctgtgatctg
ggggtagccaggaggcatgtctcctgtgttgagtatatccatggagaggacagtgaggtg
tctgaggagaggtgccatgcagccgttaaacctgctaccacagtaccctgtctggtgcag
gtgtgcaccttcagatgggatgtgaaagactggaatcagtgttcagtgccatgtgggtat
gggatccagtctagagcagtgtcctgcatgggacccactaagcctgagcccctcagccca
ctgttctgcatgcacatgccaaagcccatcaccatccggggctgccagatggacgactgc
agggtcttagagaagactagtcccctcacctacacacacaccaccaacgccccctcacta
gagaccagggaccagttaaccagttcccagggcatggaggtcactcccatggatgaggag
ccactcctgtctcctactctcagcctgacccagacacccccgactgcaacagaactgacc
accccacagaccaccacagccatgccctccgtgaccccaaaaaccagtctgtgtgggcag
cttctgctggaggagtcaggcacagtggacctgagacatgagacaggtcgctgcatcctg
tccataggccggcccctggatgaggtcatccacatgaaagtagtgttcagctccctaagc
tgcaagaaaagggagtatgtggcattctatgacaggctggtactggtcaggaagtgtgac
cagcttgaggacactgaactgacctccaggaccaacgtcctgctagtacgccagaatctc
ttgtcccccggaaacggagtgctgctcacttacagcagtcagaagaacaccaaaaagagt
caccaccaggactgtgatgtccagctgtttgctcccagcggggtcattgagaatccaacg
atgacctcagtgttgggcagtcacacctgtcgagtcctcatcaacgcccctccctcagtg
aagattaggatccgggctctgagcatgggccctgtcgtcaacagcacagcaacccagtcc
accttcattatgatacaagatgtagacgtcttgaagaccaacgtgttcaagggccaacag
ctttttgactggcgatcagctggaaacatggcggagatagaattccatggcgagtacctg
catagcaacgggagcttccgagcggaatactcatttgtggagccttga
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