Coregonus clupeaformis (lake whitefish): 121551965
Help
Entry
121551965 CDS
T08357
Symbol
gle1
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121551965 (gle1)
03015 mRNA surveillance pathway
121551965 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121551965 (gle1)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121551965 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
121551965
NCBI-ProteinID:
XP_041720582
LinkDB
All DBs
Position
18:54474495..54480843
Genome browser
AA seq
726 aa
AA seq
DB search
MPVESLRWDTLEALKNSTKGRLKYNPDWLEKGEDILSGCNEAPSLSPLSGLILKRLNMSP
RTLQKTCSLGSASRDPSPGLSEEAPVSTSSSTSPFPSANAQPTPLSSPLLVPRSKKDEEQ
QIVGDEDSATDASNDVSPVSNPILPPTISLLSPRATQMAGCIRICEEKHRAKAKMELSLR
QELQEKLVASVASRESEQLKRFEEFMELKQRQEYQSMRDMMDRETQESIGRQEKLKEEHK
NRIKILNLRLREAEQQRLREAEFERQRQVEGRERLRALNAIQEEILQLNQLLEPATPTQS
GPSPDLTSYSTRANQLCSQVSEVVRTTAEGEFPSVEDMTVAERALHEMRSLIRVMQEAAA
QAQEKRKKAQEEEEERRKLAVLQAQQEEQKKSAALSAKEKARKKGLQTKAEQSTLKWYQE
LQDSANQCAQSFEGLNNTKDIQTKKLRMELQKAATIPVSQISSISGSKLREIFDKIDKLL
SGRSVVSGGKSVSTSQHPNGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWEL
HPKVGDLILAHLHKKCPYAVPHYPPMKDGTSVEEYQKILGYRVEDGGVEAQDSFLKRMSG
MIRLYAAIIQLRWPYVSKQGPDPHGLNNGWRWLAQMLNMEPLADVTATLLFDFLEVCGNA
LMKQYQVQFWKLILLIQEDYLPRIEAVTSQGQAGSVTRLKQFLESSLRSRQIPPPKGQLI
SHFWRS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgaaagtttacgatgggatacattagaggccttaaaaaactcaacaaaggga
agactgaaatacaacccagactggctcgaaaagggggaggatattttgtcaggttgtaat
gaagctcctagcttgtccccactctctgggctcatcctgaagaggcttaacatgagccct
cgaacccttcagaagacctgctctttgggctctgcttcccgtgacccaagcccaggcctg
tccgaggaggccccagtctccacaagctcctcaaccagccccttcccttcagccaatgct
cagcccactcccctctcttctccactactggtccccaggtcgaagaaagacgaggagcag
cagattgttggtgatgaggacagtgccacagatgccagcaatgatgtcagtccagtctcc
aaccccattcttccccccaccatctccttgctgtctcccagggcaactcaaatggcagga
tgtatacgcatttgtgaggagaaacatcgtgccaaggccaagatggagctgagtctaagg
caggagctgcaggagaagctggtggcctcagtggcgagccgggagtcagagcagctcaaa
cgctttgaggagttcatggagctgaagcagagacaggagtaccagagtatgagggacatg
atggacagagaaacacaagaaagcattgggcgccaagaaaagttgaaagaagagcacaaa
aacagaataaagatcctgaacctgcgcctgagggaggcggagcaacagcgcttgcgggag
gcagaatttgagaggcagagacaggtggagggtagggagagactgcgtgctctcaacgcc
atccaggaagagatacttcaactcaatcagctcctggagccggccacacccacccagtca
ggcccctcccctgatctcacttcctatagcacccgcgccaaccagctatgctcccaggtg
tcagaggtggtgcgcacgacagcagagggggagttccccagtgtggaagacatgacggtg
gcagagcgggcactgcatgagatgaggtcactgatccgggtgatgcaggaggcggctgcc
caggcccaggagaagaggaagaaggcgcaggaggaggaagaggagcgcaggaagttggca
gtgctgcaggcccagcaggaagagcagaagaagagtgcagctctgtcagccaaagagaag
gcacggaaaaagggcctgcagactaaagctgagcagagcactctgaagtggtaccaggag
ctgcaggattccgctaaccagtgtgcacagtcttttgaaggcttgaacaacactaaggat
atccagacaaagaaactaagaatggagctccagaaggcagccaccatccctgtcagccag
atctccagtatctcaggttccaagctcagggaaatatttgacaagattgacaagcttttg
tctgggagatcagtggtatccggagggaagtctgtctccacctcccagcatcccaacggc
ctggactttgtcagctacaaactggccgagaagtttgtgaaacaaggagaggaagaggtg
gcatcccaccacgaggcagccttccccatcgctgtggtggcctccggggtgtgggagctt
caccccaaagtcggagacctcatcctcgcccaccttcacaagaagtgcccctacgcagtg
ccccactacccacctatgaaggatggcacatctgtagaggaatatcagaaaatcttaggc
taccgtgtggaagatggaggggtggaggctcaggacagctttttgaagaggatgtcagga
atgatccgcctctatgctgctattatacagctcagatggccttatgtctccaagcagggg
cctgacccacatgggctgaacaacggctggcgctggctggctcagatgctgaacatggag
cccctggcagacgtcacggcaacactcctttttgacttcctagaggtctgtggcaacgcc
ctgatgaagcagtatcaggttcagttttggaagctcattctgctcatccaagaggattac
ttgccaaggattgaagctgtcaccagccaaggccaggcgggctcagtcacaaggctcaag
cagttcctggagagttcattaagaagcagacagatccctccccccaaaggccagctgatc
tcccacttctggagatcctga
DBGET
integrated database retrieval system
