Coregonus clupeaformis (lake whitefish): 121551994
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Entry
121551994 CDS
T08357
Name
(RefSeq) rab GTPase-binding effector protein 1 isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121551994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121551994
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121551994
Protein recycling
Rab4 associated proteins
121551994
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Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
Fez1
CENP-F_leu_zip
ERM_helical
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
121551994
NCBI-ProteinID:
XP_045066707
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All DBs
Position
35:6237935..6286544
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AA seq
860 aa
AA seq
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MAEQATESARQPQHDAVIQQRVAALEQERAEFSKLKQQLESEFNQKRAKFKELYMSKEEE
LKRQAASLEGAQSELSRVQAQLEQAQADMENIKAVATVSESTKQEAVDQVKGQWQEEVVS
LQAIMKDTVREYEVQFHQRLEQERAQWNQYREAVEREMGELRHRLSEGGQEEENLENDMK
KAQEDAEKLRSVVMPMEQEIAALKAKLTMAEDRVKELEASKVKELNHVLEAEKSCRTDLE
MYVAVLNTQKSVLQEDAEKLRKELHEVCHLLELERQQHNQLKHTWQRANDQFLESQRLLM
RDMQRIENVLSSEQLRQVEEIKKRDQEEDDNERIIQEQNEEDGTETEPLEDSFLGLSIEE
PHVNHSAHGSMHSLDTDLVAGGPFDPYKDCLRRVQSTDSLGSSPGLQGLGGHNHKAKSAS
HLDESDFGPLVGADCGASEGLFGFGDTLSVSSIQLTAGHFLLTKDQEKAIKAMTPEQEET
ASLMSSISHAPDTTFLTPSGYRLVSDQEWNLLQQEVKNAGRKLGRRCDMCSNYEKQLQVI
QGQEAETRDQVKKLQVMLRQANDQLERTMSEKQELEDSVKQGNEETTAKVAALMQRVHES
ESLLNTLQEAFSQAKRNTQEQMAVLMQSREQVADELGRLQMDNDSLTGKHRLHVSLQQQE
DFKLPTTVQELQPLVLQLREDIVAVRTAADHLEEKLKAEILFLKEQLQAEQCLKENLEDT
LQLEIEGCKEEIDILEASFSSLKTELERVKDEKEQLESSLAEKSKTLESVQGLKSSLEEQ
LRELSTTKTALEAQALDEKDKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLD
RVRAILNDTNLTDISQLQET
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaggccacggaatccgcccggcagccccagcatgacgcggtgatccagcag
cgagtggcagccctggagcaggagagagccgagttctccaagctcaaacagcaactggag
tctgagttcaaccagaagcgagccaagttcaaagagctctacatgtccaaagaagaggag
ctgaagcgccaggcagcgtctctggagggggcccagtcggagctgagtcgtgtccaggcc
cagctggaacaggcccaagcagacatggagaacatcaaggcggtggccactgtgtcagag
agcaccaagcaggaggccgttgaccaggtcaagggacagtggcaggaggaggtggtctcc
ctacaggccatcatgaaagacacagtgcgtgagtacgaggtgcaattccaccagcgcctg
gagcaggagcgtgctcaatggaaccagtacagggaggcggtggagagggagatgggtgag
ctgagacaccgcctctcagagggtggccaggaggaagagaacctggagaacgacatgaag
aaggcccaggaagatgcagagaagctgcggtcggtggtgatgccaatggagcaggagata
gcagctctgaaagccaagctgaccatggcagaggacagggtaaaggagctggaagcctca
aaggtaaaggagctcaatcatgtcctggaagcagagaaatcctgccgcacagacctggag
atgtatgtggcggtgctcaacactcagaagtctgtccttcaggaagatgcagagaaacta
cgcaaagagctccacgaagtttgtcacctgttggagctggagcggcagcagcacaaccag
ttgaagcacacgtggcagcgggccaacgaccagttcctggagtcccagaggctgctgatg
agggacatgcagaggattgagaacgtgctgtcctccgagcaactccgccaggtggaggag
atcaagaagagggaccaggaggaggatgataatgaaaggatcatccaggagcaaaacgag
gaggacgggacagaaactgaacctttagaagactcatttcttgggctcagtattgaagag
ccccacgtcaaccacagcgcccacggctccatgcactccttagacactgacctggtggca
gggggccccttcgatccctacaaagactgcctgcggagggtccagtccacagacagcctg
ggttcctctcccggtctccagggcctggggggccacaaccataaggccaagtcggccagc
cacctggacgagtccgacttcggacccctggtgggggcggactgcggggcctctgagggc
ctgtttggctttggggacactctatcggtcagctccatccagctgacggccggccacttc
cttctcaccaaggaccaggagaaggccatcaaggccatgacaccggagcaggaagagact
gcctcgctgatgtccagcatttcccacgcccccgacaccaccttcctgaccccgtcaggc
taccggttggtcagtgaccaggagtggaacctgctacagcaagaggtgaagaacgcaggg
aggaagttgggccggcggtgtgacatgtgctccaattacgagaaacagctgcaagtcatc
cagggccaggaggcagagacacgcgatcaggtaaagaagctccaggtgatgctgcggcag
gccaacgaccagctggagagaaccatgagtgaaaaacaggagctggaggactctgtaaaa
cagggaaacgaggaaaccactgccaaggtagctgctctcatgcagagagtccacgagtcg
gagtcgctgctcaacacactacaagaggccttcagtcaggctaagaggaacacacaggaa
cagatggcagtgctgatgcagtctagggagcaggtagcggatgaactgggcagactgcag
atggacaacgacagcctaacaggcaaacacagactccacgtatctctccagcagcaggag
gacttcaaactacccaccacagtgcaagaactacaacccctggtgctgcaattgcgggag
gacatagttgcggtgcgcacggctgcagaccacctggaagagaagctgaaggcggagatc
ctgttcctgaaggagcagctccaggcagagcagtgcctcaaagagaacctggaggacaca
ctacagctggagatagagggctgcaaggaggagatagacatcttggaagcgtcattctcg
agtctgaaaactgagctggagcgtgtgaaagatgagaaagaacagctggagagcagcttg
gcagagaagagcaagacattagagagtgtccagggtctgaagagcagtctggaggagcag
ctcagagagctctccaccaccaagactgccctggaggctcaggcgttggatgagaaggac
aaagcccagcgcttgcagacggagctggacgtcagtgagcaggtgcagagggactttgtc
aagctctcccagaccctccaggtccagttggagcggatcagacaggctgactctctagac
cgtgtccgagccatcctcaacgacaccaacttaactgacatcagccagctccaagagaca
tga
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