Coregonus clupeaformis (lake whitefish): 121552088
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Entry
121552088 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121552088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121552088
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121552088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121552088
NCBI-ProteinID:
XP_045070751
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MVLLSDPSVVCCHEKTHSHAEDELFKKLFIGYNKWSRPIPNISDVVIVKFGLSIAQLIDV
DEKNQMMTTNVWLKQEWNDYKLRWRPSDYDNVTSIRVPSELIWVPDIVLYNNADGEFAVT
HMTKAHLFHNGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLERIEN
TVDLNNYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLPLFYTINLIIPCLL
ISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIF
VTLSIVITVFVLNVHHRSPGTHKMPRWVHSVFLDLIPRWLFMRRPAPDGRRCRLLLLQQG
AAVARRQGRTITARPPGLGPPPCLSTSASWLRDGGGTREDPRGRTPCYEDLELGALTSYF
SFRPPSPRPPGSTPPPQQNHPPPGAGQPQNRLDGGVGGGGGGGGGVNRRVNPTQQPANLV
SESRGIDFPLSPSVIRALEGLHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVC
LLGTIGLFLPPWLAGMI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggttttgctctctgacccctctgtagtttgctgtcatgagaagacacactcgcatgcg
gaggacgagctcttcaagaagctcttcatcgggtacaacaagtggtccagacccataccc
aacatctcagacgtggtcatcgtcaagttcggcctctccatagcacagctcattgatgtg
gacgagaagaatcagatgatgacgaccaacgtctggctgaagcaggagtggaatgactac
aaactacgctggaggccttctgactatgacaacgtcacctccatcagagtcccgtcagaa
ctaatctgggtcccagacatcgtcctctacaacaatgcggacggtgagttcgccgtgacc
cacatgaccaaggcccacctgtttcacaacgggaaggtgcgctgggttcccccggccatc
tataagtcctcctgttctatagacgtcaccttcttcccctttgaccagcagaactgtaag
atgaagtttggctcctggacctacgataaagctaagattgacctggaacgcattgagaac
actgtggatctgaacaactactgggagagtggggagtgggccatcatcaacgcagtggga
acatacaacaccaagaagtacgactgctgtcatgagatctaccctgatatcacatacttc
ttcatcatcagacggctgcctctcttctacaccatcaacctgatcatcccctgtctgctc
atctcctgtctcaccgtcctagtcttctatctcccttcagactgtggggagaagatcacc
ctgtgtatctccgtcctcctctccctcaccgtcttcctgctcctcatcacagagatcatc
ccgtccacctccctggtcatccctctgattggagagtacctcctcttcaccatgatcttc
gtcactctctccatcgtcatcactgtgtttgtcctcaacgtccaccaccgctccccgggg
acccataagatgcctcgctgggtccactctgtcttcctggacctgatccccaggtggctg
ttcatgaggcggccggcgccggacggaaggagatgcaggttgttgttgctccagcagggg
gcagcggtggcacggcgtcagggacggaccatcaccgccagaccaccaggcctaggccct
cctccctgcctcagcacctcagccagctggctccgggacggaggggggaccagggaggac
ccccggggacggaccccctgttatgaggacctggagctgggggcgctgacctcctacttc
tccttccgtcctccgtcacccagacctccgggctccacccctccgccccagcagaaccat
ccacccccaggggcagggcagccccagaaccgcctggatgggggggtcggaggaggagga
ggaggaggaggaggggtgaatagaagggttaacccaacccagcaaccggctaacttggtg
tcagagtctagagggatagatttccctttgtctcccagcgtgatacgggctctggagggg
ctgcactacattgcagaccacctgagggcagaggacgccgactttagtgtgaaggaagac
tggaagtacgttgccatggtgatcgaccgtatcttcctgtggatgtttatcatcgtgtgt
ctcctaggaaccattggactcttcctccctccctggctggctggcatgatctag
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