Coregonus clupeaformis (lake whitefish): 121552157
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Entry
121552157 CDS
T08357
Name
(RefSeq) laminin subunit alpha-2-like
KO
K05637
laminin, alpha 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121552157
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121552157
09142 Cell motility
04820 Cytoskeleton in muscle cells
121552157
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_I
Laminin_II
Laminin_B
Laminin_G_3
COG6_N
3keto-disac_hyd
ATG17_like
COG3_N
Motif
Other DBs
NCBI-GeneID:
121552157
NCBI-ProteinID:
XP_045067143
LinkDB
All DBs
Position
36:complement(29265153..29342875)
Genome browser
AA seq
2361 aa
AA seq
DB search
MAPSHVRECTNGYFGQPGVKGGLCQPCQCNGNLDLASPRSCDPITGSCLRCRDGYGGTTC
DTCTEGCYGDAIEAKNCQPCQCHNNGSVSDVCHKQNGQCQCKQHVVGRQCDECMPNCWWD
AEEQVCKLCSCSHAGAMSQRCDLEGRCICKPGFVGHRCDLSSQGYERRETRRPVERVPLQ
QIQRWGLSHSGRCPRGAYRPSAPQTYGIQSCGGCVPCHCNSFGSKSFDCDESGQCRCQPG
VTGPKCDRCAPGHFNFQEGGCTPCQCAHVGNNCDGNTGQCICPPNTVGESCNKCAPNHWG
HDIMAGCKACGCNQVGSMTQQCNPNTGCCMCREQFHGEKCSECRLGYRNFPQCISCNCNV
AGSDSQTCDAHQDVCTCADSTGQCSCKANIQGLKCDQCKLGTFGLSTRNPLGCSQCYCFG
MSSTCTEAQGLIRMWLSLKPEQTKLPVVDEANQQETTHGVTFQHPEIIVNADLVTQKLTE
PYYWRLPEQFQASMITAYGGKLKYTIYFEGHDETCRTSYEPQVIINGGANRNKVMVHHMQ
GLQIGQLTRHEIDMTEHEWKYEDKKAMTRKDFMDLLFYVDYVLIKGSHGNMMRHSRISEI
SMEVAEEGRPSVESERAHQIEKCNCPLGYSGLSCEECGAGFYRLSARSGGAASRVGIGSC
VQCQCNGHSEACDPETSICQNCQHNTEGDRCERCAPGYYGVVRGRPGDCKSCACPLTNHE
NNFSPSCVTEGLNNYHCTACPEGYEGKYCERCATGYHGDPRAPGGKCEESCDDDCAGLLI
SDMDRLHRIITSINLTTPLPLPHKVLYRFENMTEELKHIFSPQNSLERHLQLADSNLRSL
VTEMDDLLSRVTKVSADGEQTDNDAERIHERAKELELFVKNTLLAAEALKVKAKELNETP
GIRNGAPEKSLNEMHQEIETMLAKLRKRQLGGKKHISEEELGLAEALYQKVKRLFGDPHK
ATEDLKAEVTEKMGDHRAKLDDAQALLKDAQGKSREAGALSGQNQRNLTALERKRDALSS
VKKATEEVLEDGERILAEANGLSDNINKEIEEMERELGPLHEHLDYKVSRLTKSLSDNTL
TDLLQDAKNHAAQLKSSGILDSILAEAKNLSFNATAAFNAYRNIKDFIEEADKEAKQARA
HGTEALQLASGPKGSLKDNAKNSVQKSVQLWNEAKKLGSDVNENGESVGSLQALVKAGGL
KNKGLLKDLDNTLGKLNAIPNDTAAKLQVTKSKAGDANDTANDVLARLRDMNLNLMGLQR
NNSKLEDDVNKVNNIIKDPEKNIHVARAKVKDLEDEADRLLEKLKPIQELQDNLKKNISQ
MKELINLARKQANSIKVSVSSEGDCIRAYGPKIKKGRNNAIIVNVKTTSPDNLLFYLGST
KYIDFLAIEMRKGKVNFLWDVGSGVGKVEYPDMTINDGNWHRIEASRNGINGTISVHALE
GPRAGIMPTSKSGTSPEGYTILDVDQNAYLFVGGILGSVKKAEAVKTTTFSGCMGETYLD
NKRIGLWNYREREGDCKVCVVSPQPSDTVGTVQFDGEGYAAVSRPTRWNPNVSTVMFKFR
SFSTDSLLMYFATKDMKDFMSAELSDGHVKVRFDLGSGTGSVSSIKRHNDGRWKSFTVAR
MKKQATVAIVDIDSNEEEKLVVSSQGSATGLNLKEDERIYFGGLPTIGNYRSEVTKKRYA
GCMRDIEVSRTPYNLLSRSDYTGLTKGCSVENLHTVSFSKPGHMELKSMSFDAKTEISLS
FATKSDKGIILFGSGGTNGASSQFQLPKRRRRQSGEPFLAVLLNKGALEVLVFTGSHSPR
KMVCKPDHGILHDGREHTLRIERLGVRSFAVQVDEELKRELTLPNNQPMGIKRLFIGGIH
ADVELSSQRPNVPFEGCIWNLMINTILTDFSQSVAFENAEIGHCSNLAPPPPPLPLPEEE
PDEEEEKAKGEDVSQPVQPKAPPPTPTPRQTPPPPTDAPSVVPPELSPATEEPDHTAVTV
PPVSCAAEASPVVLEKAKQFGLSKNSHVAFEFHDTKVKNRLIIEFELRTTAESGLVFYMA
RINHADFATIQVKEGVAHLSYDLGHGNTSVSVPRIINDGHWHKIQVMREKQRGVLVIDNR
YSKHTTSPKKADILDVVGMLYIGGLPVNYTTKRIGPVLYSINGCIRKCKMLGNVLDMDTP
TSSHQVGSCFISTEKGTYFDGTGYVKAVGSYRVGLDVSLELEFRTSQSNGVLLAVSSQVD
TKMEGLGIELHGRKLLFHVDNGVGRITAEYQPEAEAGLCDGQWHSVTAHKLRHRLEIIVD
GRKEEAESPNARSNTADTNDPIYVGGYPEGLKQFGLTTSTSFKGCMRNLKITKASKVLEV
QFNKGLEFKGVQPLTCPANAA
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atggctccttctcacgtaagagaatgcaccaatggctactttggtcagccgggggttaag
gggggcttgtgccaaccctgccagtgtaacggtaacctggacctggcctcaccacggagc
tgcgaccccatcaccggctcctgtctgaggtgtagggatggctacgggggaaccacctgc
gacacctgcaccgaggggtgctacggggacgccatcgaggccaaaaactgccaaccgtgc
cagtgtcacaacaatggctccgtgtcggatgtgtgccacaagcagaatgggcagtgtcaa
tgcaagcagcatgtggtgggacggcagtgtgacgagtgcatgcccaactgttggtgggac
gcggaagaacaggtgtgtaagctgtgctcctgcagccatgcaggggccatgtcccagcgc
tgtgacctggagggacgttgtatctgtaagcccggcttcgtgggccaccgctgtgacctg
agcagtcagggttacgagcgccgggagacgcgcaggccagtagagagggtcccactgcag
cagatccaacgctggggcttgtcccactctgggcgctgtccccggggagcctaccgcccc
tcagcgccccagacctatggcattcagtcctgtggaggctgtgtcccctgccactgtaac
tcctttgggtccaagtcctttgactgtgacgagtcgggccagtgccggtgccagcctggt
gtcactgggcccaagtgtgaccgatgcgctccaggacacttcaacttccaggagggtggc
tgcacaccatgccagtgcgcccatgtgggaaataattgcgatggcaacacgggacagtgc
atctgccctccaaacactgtgggggagagctgtaacaaatgtgcccccaaccactggggt
catgacatcatggcaggctgcaaggcctgtggctgtaaccaggtgggttcaatgacccag
cagtgtaaccccaacacaggctgctgcatgtgccgggaacagtttcacggagagaagtgc
agcgagtgtaggctgggctaccggaacttcccacaatgcatttcctgcaactgcaacgtg
gctggttcggacagccagacctgtgatgcacaccaggatgtgtgcacatgtgcagacagc
actggacaatgcagctgcaaggcgaatatacagggtctaaagtgtgaccagtgtaagttg
gggacgtttggcctgagcaccaggaacccactgggctgcagtcagtgttactgcttcggt
atgtccagcacctgcactgaggcacagggcctcatccgcatgtggttgtccctgaagcca
gagcagaccaagctgcccgtagtggacgaagccaaccagcaggagaccacacatggagtg
accttccagcacccagagatcatcgttaacgctgacctggtcacccagaagctgaccgaa
ccctactactggagactgcctgagcagttccaggcgtccatgatcacagcctacggcggc
aagctgaagtacaccatctactttgaggggcatgacgagacatgccgcacctcctacgaa
ccacaggtcatcataaatggaggggccaacagaaacaaggtgatggtccaccacatgcag
ggactgcagattggacaactcacccgccatgagatcgacatgacagagcacgagtggaag
tacgaagacaagaaggccatgacacgcaaggacttcatggacctgctgttttatgttgac
tacgtcctcattaagggttcccatgggaacatgatgagacacagcaggatctctgagatt
tcaatggaggtggcagaggagggaaggccgtccgtggagagtgagcgggctcaccagata
gagaagtgtaactgcccgctgggctactccggcctgtcctgcgaggaatgtggggccggg
ttttaccgcctgtctgcccgcagcggtggcgcggcctccagagtgggcatcggaagctgt
gtgcagtgccagtgcaacgggcacagtgaggcctgtgacccggagacatccatctgccag
aactgccagcacaacacagagggggacaggtgtgaacgctgtgccccaggatactatggt
gtagtgaggggcagacccggcgactgcaagtcctgtgcctgccccctcaccaaccatgag
aacaatttcagcccttcctgtgtgacagagggattaaataactaccactgtactgcctgc
cctgagggctatgagggaaagtactgtgagagatgtgccacaggttatcacggcgacccc
cgtgcccccggcgggaagtgtgaggagtcctgcgatgacgactgtgctgggctcctcatc
agtgatatggacagattacatcgtatcatcactagtatcaacctcaccacccctctacca
ctgccacacaaagtcctctaccggtttgagaacatgacagaggaactcaagcacatcttc
tcgccacagaattcgctggagaggcacctgcagctggccgacagtaacctgcgcagcctg
gtgacagagatggacgatctgctgagtcgggtgaccaaagtatcggcagacggcgagcaa
acagacaacgatgctgagagaatccacgaaagagccaaagaactggaactattcgtcaag
aacaccctactggctgcagaagctctgaaagtcaaggctaaagagctgaatgagactccg
ggcatcaggaacggagctccagagaagagcctgaatgagatgcaccaggagattgagacc
atgctagccaagctccgtaaacgccagctgggaggcaagaaacacatctcagaggaggag
ctgggactggcagaggccctgtaccagaaggtgaagcgtctctttggggacccacacaag
gccacggaggacctgaaggccgaggtgacagagaagatgggtgaccaccgggccaagctg
gacgacgcccaggccctgttgaaggacgcccaggggaagagcagggaggctggggccctg
tccggacagaaccagcgcaacctcactgccctggagagaaagagggatgctttgagctca
gtgaagaaagcaactgaagaggtgctggaagacggagagcgcattctggctgaagccaac
gggctctcagacaacatcaataaggagattgaggagatggagcgtgagctgggtcctctc
catgagcacctggactacaaggtgagccgtctgaccaagagcctgagtgacaacaccctg
actgacctgctgcaggatgctaagaaccatgctgcccagctcaagtcctcgggcatcctg
gacagcatcctggcggaagccaagaatctgtcctttaacgccacggcagcgttcaacgca
tacagaaacatcaaggacttcatcgaggaggctgacaaagaggcaaagcaggccagggca
cacgggacagaggcccttcagctggcctcaggacccaaaggctctttgaaggataacgcc
aagaactctgttcagaagagcgttcaactgtggaacgaagccaagaaattagggagcgat
gtgaacgagaacggtgagagtgtgggcagtctccaggccctggtgaaagctggtggcttg
aagaacaagggcttgctgaaggatctcgacaatacattagggaagctgaatgcaatcccc
aatgatacagcagccaaactccaggttaccaagtccaaggcaggagatgccaacgacaca
gccaacgacgtgctggcccgactgagagacatgaacctgaacctgatgggcctgcagagg
aacaacagcaagctggaggacgacgtcaacaaggtcaacaacataatcaaggaccctgag
aaaaacatccatgtagcgagggccaaggtgaaggacctggaagacgaggcagacagactg
ctggagaaactgaagcccatccaggagctacaggacaacctgaagaaaaatatctcccag
atgaaagagttgatcaacctggcgcgcaagcaggccaactctattaaagtgtctgtgtcc
tccgagggagactgtatccgcgcatatggaccaaaaatcaagaagggtcgcaacaacgcc
atcattgtgaatgtgaaaaccacctcccctgataacctactgttctacctgggcagtacc
aaatacattgacttcctggcaattgagatgcgtaagggaaaggtcaacttcctgtgggac
gtgggctccggagtgggtaaggtggagtaccctgacatgactataaatgacggcaactgg
catcgcattgaggcctcacggaatggcatcaatggcaccatttctgttcatgcactggag
ggtcccagagctggcatcatgcccacctctaagagtggcacctcccctgagggctatact
atcctggatgtggaccagaatgcctacctgtttgtcggtggcatattgggcagtgtgaag
aaagcggaggcggtcaaaaccactactttctccgggtgtatgggagagacatacctggac
aacaaacgtattggcctgtggaactacagagagagagaaggagactgcaaagtatgtgtg
gttagcccccagccgtcagacacagtggggacagtacagtttgatggggagggctacgct
gcagtgagccggcccaccagatggaaccccaacgtctccaccgtcatgttcaagttccgc
tccttctccaccgactccctgctcatgtactttgccaccaaggatatgaaggactttatg
agtgctgagttgagtgatggtcatgtgaaggttcgttttgacctgggctcaggcaccggc
tcggtctccagcatcaagagacacaacgacggcaggtggaagtctttcactgtggcccgc
atgaagaaacaagctacggtggccatcgtggacatagactccaatgaagaggagaagctg
gtggtgtcatctcaaggctctgccactgggctcaacctcaaggaggatgagaggatctac
tttggtggtttgccaaccattggaaactacaggtcagaggttaccaagaagaggtatgct
ggctgtatgagagacattgaggtttccagaaccccctataacctgctgagcagatccgac
tacaccggtctgaccaaaggctgctctgtagagaacctccacacagtgagcttctctaag
ccaggtcacatggaactgaagtccatgtcctttgacgctaagacagagatcagcctgtcc
ttcgcaaccaagagtgacaagggcatcatcctgtttggcagtgggggaacgaatggggcc
agctcccagttccaactccccaagaggagacgcaggcagtctggggagcccttcctggct
gtgttgctgaacaagggggccctggaggtgctggtgtttacaggtagccacagcccacgc
aagatggtctgcaagcctgaccacggcatcctgcacgatgggagagaacacaccctgcgc
attgagagactgggcgtcaggtcatttgcagtccaggtggatgaggagctgaagagggag
ctgacccttcccaacaaccagccaatgggcatcaagagactgttcatcgggggtatccac
gctgacgtagagctcagctcccagagacccaacgtccctttcgaaggctgcatctggaac
ctcatgatcaataccatcctcacagacttctcccagtctgtggcctttgagaatgcagag
atcggccattgttccaacctggcccctccccctccccctctgcccctcccagaggaggag
cctgatgaggaagaggagaaggccaagggagaagacgtgtcccagccggtccaacctaag
gctccaccacccaccccgacacccagacagacccctccacctcccactgacgcgccctct
gtcgtacctccagagctcagccccgccacagaggaacccgaccacaccgctgtcacagtc
ccaccggtttcctgtgctgccgaggcatctccagtggtcttagagaaagccaaacagttt
gggctctccaaaaacagccatgttgcatttgaatttcatgacacaaaggttaagaacagg
ctaatcatagagtttgagctgcggaccacagcagagtcaggcctggtgttctatatggca
aggatcaaccacgctgactttgccaccatccaggtgaaggagggcgtggcccacctcagc
tacgacctgggccacggcaacacctccgtcagcgtgccacgcatcatcaacgacggacac
tggcacaagatccaggtgatgagagagaaacagagaggtgtactggtgatagacaaccgc
tactccaagcacaccaccagccccaagaaggctgacatcctggatgtggttggtatgctg
tacataggtggcctacctgtcaactacaccaccaagaggatcggaccagtcttgtatagt
atcaatggctgcatcaggaaatgtaagatgctgggtaatgtgttggacatggacacgccc
acctccagccaccaagtgggcagctgtttcatcagcactgagaagggaacctacttcgat
ggcactggatatgttaaagcagtgggttcctacagggtgggtctggacgtgtctctggag
ctggagttccgtacgtcccagagcaacggggttctgctagcggtcagcagccaggtggac
accaagatggagggcctgggcatcgaactgcacggcagaaagctgctgttccacgtggac
aacggggtgggccggatcacagccgagtaccagcctgaagcagaggcaggcctctgtgac
ggtcagtggcactcagtcactgcccacaagctccgccataggctggagatcattgtagac
ggcaggaaggaggaagcagagagccccaacgccaggtccaacaccgctgacaccaacgac
cccatctacgttggtggatacccagaggggctcaagcagtttggcctgactaccagcact
tcattcaagggctgcatgcgcaacctgaagataaccaaggcatccaaagtgttggaggtt
caattcaacaagggcctggagttcaagggagttcaacccctcacctgcccagccaatgca
gcctaa
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integrated database retrieval system