Coregonus clupeaformis (lake whitefish): 121552187
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Entry
121552187 CDS
T08357
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like isoform X2
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00562
Inositol phosphate metabolism
cclu01100
Metabolic pathways
cclu04020
Calcium signaling pathway
cclu04070
Phosphatidylinositol signaling system
cclu04081
Hormone signaling
cclu04082
Neuroactive ligand signaling
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04270
Vascular smooth muscle contraction
cclu04310
Wnt signaling pathway
cclu04371
Apelin signaling pathway
cclu04540
Gap junction
cclu04621
NOD-like receptor signaling pathway
cclu04912
GnRH signaling pathway
cclu04916
Melanogenesis
Module
cclu_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121552187
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121552187
04371 Apelin signaling pathway
121552187
04020 Calcium signaling pathway
121552187
04070 Phosphatidylinositol signaling system
121552187
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121552187
04081 Hormone signaling
121552187
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
121552187
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121552187
09152 Endocrine system
04912 GnRH signaling pathway
121552187
04916 Melanogenesis
121552187
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121552187
04270 Vascular smooth muscle contraction
121552187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121552187
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
121552187
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121552187
Endocytosis
Macropinocytosis
Phospholipase C
121552187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
PLC-beta_C
C2
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
121552187
NCBI-ProteinID:
XP_041720843
LinkDB
All DBs
Position
36:23638555..23766255
Genome browser
AA seq
1228 aa
AA seq
DB search
MTKSYEFNWQKHLPGFMQEGASFDRFDEDPFLFEPNCLVKVDEFGFFITWKSDGKEGQVL
ECSLINSIRVGAVPRDPKILSSFEAVGKKEEELEGSVICICSGTDLVNLSFMYMVADSPD
TARKWTEGLRSVIHNFRANNVCPMTCLKKHWMRMCFLTNVNGKIPVRTITRTFASGKTEK
GIFQALKELGLPSGKNDEIEHSAFPFDIFYALTQKICPRTDIEELFKKINGDKSDFLNVD
QLVSFLNENQRDPRLNEILFPFYEPKRAMQIIEKYERDPDLKKKGRMSSDGFCRYLMSDE
NAPVFLDCLELYQDMEQPLAHYFIASSHNTYLNGRQFGGKSSVEMYRQVLLSGCRCVELD
CWDGKGEDQEPIITHGKAMCTDILFKDVISAIRETAFVTSEYPVILSFENHCSKPQQYKM
ARYCEEIFGDYLLRHPLEGYPVEAGRPLPSPNDLKRKILIKNKRLKPEVEQKQLESFKKH
MEAGETNTPAILLGAETEEDVENALGDVKDVIPDLKTSTSEEPSEENSLSTSVSISDSVS
VNKDREEKERDNSIKKVVEEDPTEMSEATEATDATDISEASEDNNNKKTGETTDDEEALI
ASYTYVGATTNIHPYLSAMVNYAQPVKFQSFDVAEERNIHHNMSSFNESVGLGYLKTNAI
EFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVSLNYQTPDLAMQLNQGKYEYNG
SCGYLLKPDFMRRSDRMFDPFSETPVDGVIAATCSVQVFSGQFLSDKKIGTYVEVDMYGL
PTDTIRKEFRTRMVMNNGLNPAYNEEPFVFRKVILPDLAVLRIAVYDDNNKLIGQRILPL
EGLQAGYRHISLRNEGNKPLSLPTVFCNIVLKTYVPEGFGAIVDALSDPKKFLSIAEKRA
DQMRALGIETSDIADVPNESSKNDKKGKVNANVKANVTPQTSSDPAQSSKSAQNNTTETK
KDTNTLVPHVNIDDLKQMKTYLKQIKKQQKELNSLKKKHAKDRTIMQKSHCTQVDKMIAQ
HDKEKLTQEKLLEKAIKKRGESNCLELKKETESKVESLTTDHKAKVKDITAQHTKEWSEM
INSHSSVEQDMKDIHVVQQCEHLKKLLSGVQEQQTLSLKLIHERQSKDMRANQAKTSMEN
SKAISQDKTIKNKAERERRVRELNSSNTKKFLEERKRLAMKHQKEMETLEKSQKEQLEEL
DKFNEQAKDIQQMVKLEEEMDRRPATVV
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcctatgagtttaactggcagaagcacctgcctggcttcatgcaggaagga
gcttccttcgacaggtttgacgaggatccgtttctgtttgagcccaactgtctggtcaaa
gtggacgagtttggcttcttcatcacgtggaagagcgatggaaaggagggccaggttcta
gaatgttctctgatcaacagtattcgagtcggagccgtgccaagggaccctaagatcctg
tcttcgttcgaggcagtggggaagaaggaggaggagttggaggggagtgtcatctgcatc
tgcagcggcactgacctcgttaacctctccttcatgtacatggtggctgacagtccagat
actgctaggaagtggacggagggtttgaggtcagtgatccacaatttcagagccaataac
gtctgtcctatgacctgcctcaagaaacattggatgaggatgtgctttttgaccaacgtg
aacggcaaaatcccagtgagaaccatcacacggacatttgcatctgggaaaaccgagaaa
ggaatctttcaggctctgaaggaactgggactgcctagtggaaagaacgatgagatagaa
cattcagcgttccccttcgacatcttctatgccctgactcagaagatctgccctcgtact
gacatcgaggaactcttcaagaaaatcaatggggacaaaagtgattttttaaacgtagac
cagttagtcagctttctgaatgaaaaccagcgcgacccgcggctaaacgagatcctgttc
cccttctacgaacctaaacgagccatgcagatcatcgagaagtacgagagagaccccgac
cttaagaagaaaggccgtatgtccagtgatggcttctgcaggtacctgatgtcagatgag
aatgccccggtgttcctggactgcctggagctctaccaggacatggagcagccgctggcc
cactacttcatcgcctcctcccacaacacctacctgaacgggaggcagttcggagggaag
tcctccgtggagatgtacagacaggtgctgctctccggctgcaggtgtgtagagctggac
tgctgggatggtaaaggagaagaccaggagcctattatcactcacgggaaggccatgtgt
actgacatcctcttcaaggacgtgatctcagccatcagggaaacagcctttgtgacgtct
gagtatcctgtgatcctgtcatttgaaaaccactgcagtaaaccccagcagtacaagatg
gctcggtattgtgaggagatctttggagactacctactgaggcatcctctcgagggatac
cctgttgaagcgggccgtcccttgccttctcccaacgacctcaaacgcaaaatcctcatc
aaaaacaaacgcttgaaaccagaggtggaacagaagcagttagagtcctttaagaagcac
atggaggcaggagagaccaacacaccagccatcttactgggagcagagacagaggaagat
gtggagaacgctctaggtgatgtgaaggatgtgattcctgacttgaagaccagtacctca
gaggagcctagtgaagagaacagcctcagcaccagtgttagtatcagtgacagtgtcagt
gtgaacaaagacagagaggagaaggagagggacaacagcatcaaaaaggtggtggaggag
gatccaacagagatgtctgaggccacagaagcaacagacgccacagacatctcggaggct
tctgaggataacaacaacaaaaagactggcgagactacggatgacgaggaggctctgata
gcctcgtacacgtacgtaggagccaccaccaacatccacccctacctctctgccatggtt
aactacgcacagcctgtcaagttccagagcttcgacgtcgcagaagagaggaacattcac
cacaacatgtcgtcatttaacgagtcagtgggtctgggttatctgaagaccaacgccatc
gagtttgtcaactacaacaagcgtcagatgagtcggatctaccctaaaggaggcagggtg
gactccagtaattacatgcctcagatcttctggaacgcaggctgccagatggtctccctt
aactaccagaccccagatctggccatgcagttgaaccagggaaagtatgagtacaatgga
tcctgtgggtatctgttgaagccagacttcatgcgtcgctcagacaggatgtttgacccc
ttctcagagacacctgtggatggggtcattgctgctacctgcagtgtacaggtgttttct
ggtcagttcctgtctgataagaagattgggacctacgtggaggtggacatgtacgggttg
cccacggacaccatccgcaaagagttccgcacgcgtatggtgatgaacaatggcctgaac
cctgcctacaatgaagaacctttcgtcttcaggaaggtgattctaccagacctggctgtg
ctgcgtatagctgtgtatgatgacaataataagctgataggtcagaggatcctaccattg
gagggtctacaggcaggatacagacacatttctctacgcaatgaagggaacaagcctctg
tctttacctactgtcttctgtaacatagtactcaagacctacgtacccgaaggcttcgga
gccatcgtggatgccctgtcagacccaaagaagttcctgtccatagcagagaagagagcg
gaccagatgagagctctggggattgaaacgagtgacatagcagatgtgccaaacgagagt
tcgaagaacgacaagaaagggaaggtgaacgccaacgtgaaggccaacgtcacgccacag
accagctcggacccggctcagtcctctaagtctgcccagaacaacaccacagagaccaag
aaggatacaaataccctcgtgcctcatgtgaacattgatgacttgaaacagatgaagacg
taccttaaacagattaagaagcagcagaaagaactgaactctttaaagaagaagcatgca
aaggaccgcaccatcatgcagaagtcccactgcacccaggtggacaagatgatcgctcag
cacgacaaggagaagctgacacaggagaaactgttggagaaggccatcaagaaacgagga
gaaagcaactgtctggagttgaagaaggagactgagagtaaagtggagagcctgaccact
gaccacaaggctaaggtgaaggatattacagcccagcacactaaggagtggtcagagatg
atcaactcccacagcagtgttgagcaggatatgaaggacatccacgtggtccaacagtgt
gaacacctcaagaaactactgagcggagtccaggaacaacagactctatcgctcaaactg
atccacgaacgccagagcaaggatatgcgggccaaccaggccaagacatccatggagaac
agcaaggccatcagccaggacaagaccatcaagaacaaggccgagagggagaggagagtt
agagagttgaacagcagcaacaccaaaaagttccttgaggagaggaaaaggttggctatg
aagcatcagaaggagatggagacactggagaagtcgcagaaagaacagctagaggaactg
gacaagttcaatgagcaggccaaggacatccagcagatggtgaagctggaggaggagatg
gaccgcagaccagccacagtggtctga
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integrated database retrieval system
