Coregonus clupeaformis (lake whitefish): 121552198
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Entry
121552198 CDS
T08357
Name
(RefSeq) integrator complex subunit 9 isoform X1
KO
K13146
integrator complex subunit 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121552198
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121552198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IntS9_C
Lactamase_B_6
Beta-Casp
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
121552198
NCBI-ProteinID:
XP_041720861
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDTTSVLQFLPLPLVHSPRLSKLPGWVSKDG
TINLEKELKECAGRVFVDSQPEFCLPEKELLDLSTIDVILISNYHCMMALPYITEHTGFT
GTVYATEPTLQIGRLLMEELVNFMERVPKAQSATCWKYKEIQRLLPGPLKDAVEVSTWKR
CYSMQDVNSALSKVQLVGYSQKVELFGAVQVTPLSSGYSLGSSNWIIQSHYEKVSYVSGS
SLLTTHPQPMDQSSLKNSDVLILTGLTQMPTANPDGMLGDFCSNLAMTIRAGGNVLVPCY
SSGVIYDLLECLYQFIENANLGSTPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEP
PFPHAELIQTNKLKHYPSIHGDFSSEFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTI
IFTEPDFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKEVQPLHVVCPEQYTQPPP
AQSHRSDLMLELQPPPMPYRRCSVLGLPFRRRYERIQLLPELAKSLVPSEIKPGISIATV
SAVLQSKDNKHTLQVSPVPKPPPLPPSKKRKRVVEEPPEVLAPKPLLSGAVPLEAFLAML
HKHGITEVKVEETADGHILHLQAEDTLIQLEEDGTHIVCDDNEPLRTALRDLVLRFLMKL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgtactgtctgtcaggtcaccccaccctgccatgcaatgtcctcaaattcaaa
tccaccaccatcatgttggactgtgggctggacactacctctgtcctgcagtttctacca
ctgcctctggtgcacagcccaaggctttccaagctccctggatgggtgtctaaagatggc
acgataaaccttgagaaggagctgaaagagtgtgcaggtcgcgtctttgtagactcacag
ccagagttctgtctccctgagaaagagctgctggacctgtccaccatagacgtcattcta
atctccaactaccattgtatgatggccctgccttacatcaccgagcacacaggcttcact
gggaccgtgtacgccacagagccaacgctgcagatcggcagacttctgatggaggagctg
gtaaacttcatggagagagttcccaaggcccagtctgccacctgctggaagtataaggaa
atacaaaggctgctccccggcccgcttaaggatgctgtagaagtgtcgacttggaagaga
tgctacagtatgcaggatgtcaactctgctctcagcaaggtgcaactcgtgggctactcg
cagaaagtggagctgtttggcgccgtgcaggtcacacccctgagctctggttactcattg
ggtagctctaactggattatccaatcacattatgagaaggtttcgtatgtctctggctcc
tccctcctcaccacacatccacagcccatggatcagagctccctaaagaacagtgacgtt
ctgattctgacgggcctcacacagatgccaaccgccaacccagatggcatgctaggggac
ttctgcagtaacctagccatgacgatccgtgctgggggcaacgtgctggtaccatgctat
tcctcaggggtgatctatgatctcctggagtgcctctaccaattcatagagaacgccaat
ctaggctccacccccttctacttcatctcgcctgtcgccaacagctctctggagttctca
cagatcttcgcagagtggctttgtcacaataagcagtccaaggtctaccttccagaacca
cctttccctcacgctgagctgattcagacgaacaagttgaagcactaccccagtatccat
ggcgacttcagcagtgagttccggcaaccgtgtgtggtgttcaccggacacccgtctctt
cgcttcggggacgtggtgcacttcatggaactgtggggcaaatccagcctcaacactata
atcttcactgaaccagacttctcctacctggatgcgttagccccgtaccagcccctagcc
atgaagtgtgtgtactgccccattgacactcgcctcaacttccaccaggtctccaagctg
ctcaaggaggtccagcctctccatgtggtgtgtccagagcagtacacccagccaccgcca
gcccagtcccaccgctcagacttgatgctggagctgcagccccctcccatgccctatcgc
cgctgctctgtgctgggtctgcccttcagacgccgctacgaacgcatccagctgctgcca
gagctggccaaatccctagtgccctctgagatcaaacctggcatctctatagcaactgtg
tccgcagttctgcagtccaaggataacaagcatacgctgcaggtcagtccagttcccaag
ccccctccgctgccccccagtaagaagaggaagcgtgtagtagaggagcccccagaagtg
ctggcccccaaaccactgcttagtggagctgtacccctggaagccttcttagccatgcta
cacaagcacggtatcacggaggtcaaggtagaggagacggcagacggccacattctgcac
ctgcaggccgaggacactctgatccagctggaggaggacgggacacacattgtgtgtgac
gacaacgagccactccgcaccgctctcagggacctggtgctgcgcttcctcatgaaactc
taa
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