Coregonus clupeaformis (lake whitefish): 121552202
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Entry
121552202 CDS
T08357
Name
(RefSeq) CD2-associated protein isoform X1
KO
K13738
CD2-associated protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121552202
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121552202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121552202
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121552202
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
121552202
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121552202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Tmemb_cc2
Motif
Other DBs
NCBI-GeneID:
121552202
NCBI-ProteinID:
XP_041720867
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Position
36:complement(10033290..10108000)
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AA seq
666 aa
AA seq
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MVEVVVEYEYEALHEDELTLRLGEVIRNVRRIEEEGWMEGDLNGKRGLFPDNFVKEVKKE
PKEVNVTKEEAKEEAQPQRREKSAGNVANLVQRMSTYGIPAGGFQPHSMPRGLKKSKSEP
KKRQCRALFEYVPQNEDELELKIGDIIDINEEVEEGWWSGTMNGKSGLFPSNFVKEIETN
ADGQTNDLTDEGDGSGKEALLPPSPTHPSPGNGVITQPKKIRGVGFGDIFREGSVKLKVR
LPSTDGEEKKDKPIPLLPSAAKPAHSNATDSQKAEGDSKAKVKEYCKATFAFEATNEDEL
TLKEGDVIQILSKDTGEPGWWRGEVGGKEGVFPDNFVAVMSDADKEPAPTSRGSVKLSPK
QEPEERPKKPPPPSKSIARKPEVPLADKKPLHPPPEDRGDKTDHKLSKPTAPLVPPKKPV
PPPGKGRPGILPPKRPDKPLAPSLGAKHNGEVPSILPKSDFETTLPSKPKTLSNDLDMDL
MSFDDLSSTSDKLSHPTTNRPKMPGRRLPAQFGGGHSPNKDISVEKTFKFDEEDRPKPKL
IDTRKPSMPSSLSQSPVLKPSPSLSEGLKASPALAPDRRSPSPSSSRSRSPGPSTETKPK
AESEEQKSELQDLRAQMKDLLLSVELLKTQQMREMAELRSELDEERLKRVALQMEIEKLK
KMVHST
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggtagaggttgtggtggagtatgagtatgaagccctccatgaagatgagctgaccctg
aggctgggagaagtgatcaggaatgtccgcaggattgaggaggagggatggatggaggga
gacctcaacgggaagagaggactcttccctgacaacttcgtcaaggaggtgaagaaggag
cccaaggaggtgaacgtgaccaaagaggaggccaaggaggaggcgcagccccagcggaga
gagaagagtgcggggaacgtggccaacctggtccagaggatgagcacctatggcattcca
gctgggggcttccagccacactcaatgccccgcggactcaagaagagtaagtcagagcct
aagaaacggcagtgcagggctctgtttgagtatgtgccccagaacgaggatgagctggag
ctgaagataggggatatcatcgacatcaatgaggaggtagaggaaggctggtggagtgga
accatgaacggcaaatcaggactgttcccctctaacttcgtcaaagagatcgagacaaac
gcagatggacagacgaacgacttaacagatgaaggagatggcagcggtaaagaagctctg
ctccccccctctcccacccacccctctccaggcaatggagtgatcacccagccaaagaag
attcggggggtgggctttggggacattttcagggaaggctcagtcaagctaaaggtccgc
ctgcccagcacagatggagaggagaagaaagacaaaccaatcccattattaccatctgcc
gcaaagcccgcccattccaacgcgacagactcacagaaagcagagggggacagcaaagca
aaagtaaaagaatactgcaaggccacctttgcttttgaagccacaaacgaagacgagctg
acactaaaagagggtgacgtcatacagatcttgagtaaggacacaggggagccggggtgg
tggagaggggaggtcggaggtaaagagggggtttttcctgacaactttgtggctgtgatg
tcagacgcagacaaagagccggctcccacatcaagaggatcagtcaaactgtctcccaag
caggaaccggaagagagacccaagaagccaccgccaccatcaaaaagcatagctcgcaaa
cccgaggtcccgttggctgacaagaagcccctgcatccgcctcctgaggacagaggtgac
aagacagatcacaaactgtcaaagcctactgcccccctggtccctcccaagaaacctgta
cctccgccaggcaagggcagaccaggcatcctccccccaaaacgaccagacaagcctctc
gctccctccctaggggccaagcacaatggagaggtgccttccatactcccaaagtcagac
tttgagacaacgttacccagcaaaccaaaaacgctgtcgaatgaccttgacatggacctg
atgagctttgatgatctgtcgtctacctctgataagctgtctcaccccaccactaacaga
ccaaagatgcctggcaggaggctgcccgctcagtttggaggaggccactctccaaacaag
gacatcagcgtggagaaaaccttcaagtttgacgaggaggatcgccccaagccaaagttg
atagacacaagaaagccatccatgcccagctcactctcccagtctcctgtcctcaagccc
agcccatccctgtcggaggggctcaaagccagcccggctttggcccctgaccgcagaagc
cccagccctagctccagccgaagccgcagcccaggccctagcacggagaccaagcccaag
gcagagtcagaggagcagaagtctgagctgcaggacctcagagcccaaatgaaagatctg
ctgctgtctgtggagctcctcaagacccagcaaatgagagagatggcagagctgaggagc
gagctggacgaggagaggttgaaacgagtggccctgcagatggagatagagaaattaaag
aagatggttcattcaacgtga
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