Coregonus clupeaformis (lake whitefish): 121552266
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Entry
121552266 CDS
T08357
Symbol
abcb11a
Name
(RefSeq) bile salt export pump
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121552266 (abcb11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121552266 (abcb11a)
04147 Exosome [BR:
cclu04147
]
121552266 (abcb11a)
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
121552266 (abcb11a)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121552266 (abcb11a)
BRITE hierarchy
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_16
AAA_29
Rad17
AAA_15
AAA_7
Zeta_toxin
AAA_21
DUF4804
ThiF
Motif
Other DBs
NCBI-GeneID:
121552266
NCBI-ProteinID:
XP_041720980
LinkDB
All DBs
Position
4:17355075..17365439
Genome browser
AA seq
1337 aa
AA seq
DB search
MKDHIYQKKVTSLQDDTDKEYWQTKPDREEKGNEKGDGKKKQKLLDVGFFQLFRFATWKD
RLMMVVGGLCALVHGAASPLMLLVYGMMTNTFVAYELEVQELADPNKTCINNTITWINGS
IFEIAENTTVFCGVDIEAQMTMFAYYYVGIGLGVLIVSYFQIALWVSAAARQIQRIRKTY
FRKVMRMEIGWFDCNSVGELNTRISDDINKINNAIADQVSIFIERISTFIFGFMVGFIGG
WKLTLVVIAVSPLIGIAAGLMAMAVARLTGRELQAYAKAGAVADEVLSSIRTVAAFGGED
KEAERYDKNLIEAQNWGVKKGTIIGMFQGYLWCIIFLCYALAFWYGSKLVIETKELSPGT
LIQVFFGVLMAAMNLGQASPCLEAFASGRAAAKTIFDTIDREPEIDCFSEEGHKLDKVKG
DIEFHNVTFNYPSRPEVKILDSLSMLIRAGETTAFVGPSGSGKSTTVQLFQRFYNPKEGM
LTLDGHDIRSLNIQWLRSLIGIVEQEPVLFATTIADNIRYGRPGVTMDDIIQATKEANAY
NFIMDLPQRFDTLVGEGGGQMSGGQKQRIAIARALIRNPRILLLDMATSALDNESEAIVQ
EALDTARMGRTTITIAHRLSTIRNADVIIGFEHGRAVESGTHNDLLEKKGVYFTLVTLQN
QGNDMPNDKANIGPDNKTIEEEILQSFSRGSYESGLRQSLRLRSHTQLSNELIPDAIAGS
IKIKSDKFLATMENDMEPQRSKHSKEEAEERVEPAPVARILKYNKSEWPYMLLGSIGAAI
NGSVNPIYAILFSQILGTFSIRDLDEQRVQINGICILFCAVAVTSFFSQFLQGYAFGKSG
ELLTRRLRKVGFQAMLKQEVGWFDDPRNSPGALTTRLATDASMVQGATGSQIGMIVNSLT
NIGASFIIAFSFSWKLSLVVICFLPLIGLSGVFQVKMLTGFANEDKKAMEAAGQVSSEAL
ANIRTIAGLCKESTFVDTYEQQLEAPYMSAKKKANIYGICFAFAQCVIFMAYAASFRYGG
FLVSSERLHYLVVFRVISAIVISGTALGKASSFAPDYAKAKTAAAQFFKLLDRVPKISMS
QTDGEKWDDFKGELEFINCKFTYPTRPDIQVLNGLLVSVKPGQTLAFVGCSGCGKSTSVQ
LLERFYDPDEGRVLIDGRPSHTVNVPFLRAQIGIVSQEPVLFDCSIAENIQYGDNTRNMS
MEEIVDAAKKAYLHDFVMTLPDKYETQVGAQGSQLSRGQKQRIAIARAIVRNPKILLLDE
ATSALDTESEKTVQAALDEARRGRTCIVVAHRLSTIQTADIIAVMSQGAVIERGTHEELM
AKRAAYYKLVTTGAPIS
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcatatttaccagaaaaaggtcacttctctacaggacgacactgacaaagaa
tattggcaaacaaaaccagacagagaagaaaaagggaatgaaaaaggagatggaaagaaa
aaacaaaagctcttggacgttggattctttcaactgtttcgatttgcaacatggaaggac
agactgatgatggtagtcgggggcttatgtgctctagtccacggagcagcctcccctctc
atgctcctggtgtacggcatgatgacaaacacctttgtggcatacgagctagaggtccaa
gaactggcagaccccaacaaaacctgcattaacaacaccatcacctggatcaatggctcc
atatttgaaatagcagagaacacaacagtcttctgtggggtggatatcgaagcacagatg
accatgtttgcatattactatgttggtattggattaggagtcttgattgttagttatttc
caaattgccctctgggtgtctgctgctgccagacagatccagagaatcaggaagacttac
tttaggaaggtcatgcgaatggagattggctggtttgactgcaattcagttggagaatta
aacaccaggatatcagacgacatcaacaagatcaacaatgcgatagctgaccaggtgtct
atcttcatcgagaggatctccacttttatcttcggctttatggtggggttcattggagga
tggaagttgactctggtggtcattgcagtaagcccactaataggaattgctgctggacta
atggccatggctgttgccagactgacaggtcgggagctccaggcctatgccaaggcaggg
gcggtagctgatgaggtactgtcatccatcagaacagtggcagcctttggaggggaggac
aaggaggctgaaaggtatgacaaaaaccttattgaggctcagaactggggtgtgaaaaaa
gggacaatcattgggatgtttcaaggatacctgtggtgtatcatcttcctctgctatgct
ttggcattctggtatggctcaaaactggtcatcgaaaccaaagagctatcccctggtact
cttatccaggtattctttggagttctcatggcagctatgaacctgggtcaggcctcaccc
tgcctggaagccttcgcctcaggtcgagctgcagccaagaccatcttcgataccattgac
cgggagccagaaatcgattgtttctcagaggagggccacaaattagacaaggtcaagggt
gacattgaattccacaacgtcacatttaactacccctctcggccagaagtgaagatttta
gattctttgagcatgctgatcagagcaggagaaaccacagcttttgttgggccaagcgga
tcagggaagagcaccacagttcaactctttcagagattctacaaccccaaggaaggaatg
ttgactttggatggccatgacatccgcagcctgaacatccagtggcttcgctctctgatt
ggtatagtagagcaagagccggtgctgtttgccacaactatcgctgacaacatccgctac
gggcgacctggggtcaccatggacgatatcatccaggccaccaaggaggctaacgcctat
aacttcatcatggacctcccacagaggtttgatacgctggtgggtgagggtggtggtcag
atgagtggaggacagaagcagaggatcgctatcgcccgagctctgatccgcaaccccagg
atcctgctgctggacatggctacctcggctctggacaacgagagtgaggccattgtacag
gaggcacttgacacggctcggatgggcaggacaaccattaccatcgcccaccgcctttcc
actatccgcaatgctgatgtcattattggctttgagcacggaagggcagtggagagcggt
acacacaatgatcttctagaaaagaagggtgtctactttactcttgttacccttcagaac
caaggaaatgacatgcccaatgacaaagcaaacataggtccggacaataaaaccattgag
gaagaaatccttcagagtttcagtcgaggaagctatgaatctgggttgaggcaatctctt
cgcctgcgatctcacacccaactttcaaacgaactcatccctgatgctatagctggcagt
atcaaaattaaatcagacaaattccttgccacaatggaaaacgacatggaacctcaaaga
tcaaagcattccaaggaggaagcagaggaacgggtggagccagcaccagtggctcgaatc
ctgaagtacaacaagtcagagtggccctacatgctattgggatctataggagctgcaatc
aacggctccgtcaatccaatctatgctattttattcagccagatccttgggacgttctct
atacgtgacttggatgaacagagagtgcagatcaatggaatatgtatcctgttctgcgct
gtggcggtgacaagtttcttctctcagttcttacagggctatgcatttgggaagtctggg
gagctgctgacccgcaggctaaggaaggtgggcttccaggccatgttgaaacaggaggta
ggctggtttgatgaccccaggaacagcccaggagctctcaccaccaggctggccaccgat
gcctccatggttcagggggcaactggatcgcagattgggatgattgtgaactccttgacc
aacatcggagcgtctttcatcattgcgttctccttcagctggaagttaagcttggtagtg
atttgctttttaccactcattggcttgtctggggtcttccaagtcaaaatgctgacaggt
ttcgcaaacgaggataagaaggcaatggaagcagcaggacaggtgtccagcgaggctcta
gccaacatcaggaccatcgcagggctgtgcaaggagagcacatttgtggatacgtatgaa
cagcagctggaggctccctatatgtctgccaagaagaaggcaaacatctatggcatctgt
tttgcctttgctcagtgtgttatctttatggcgtacgccgcctcgtttagatatggaggc
tttcttgtcagctctgaaagattacattacctggtggtcttcagagtgatctctgccatt
gtgatcagtgggacagcactgggaaaagcttcctcattcgccccagattatgccaaagcc
aagactgcagctgcccagttcttcaaactgttggaccgagtccccaaaatcagcatgagt
cagacagacggggagaaatgggatgatttcaaaggggagttagaattcatcaactgcaag
ttcacatacccaacccggcctgacatccaggtgctaaatggactactggtgtctgtgaaa
ccgggccagaccctggcctttgtgggctgtagtggctgtgggaagagcactagtgtgcag
ctgttggagaggttctatgatccagatgagggcagagtgttgatcgatggccgtccatca
cacactgtcaacgtgcccttcctgagggctcagattggcattgtctcccaagagccagtg
ctgtttgactgcagtattgctgaaaacatccagtatggtgataacaccaggaacatgagc
atggaggagattgttgatgctgcaaagaaagcttatctccatgactttgtgatgactctg
ccagataaatatgagactcaggttggtgcccagggctcccagctctccagagggcaaaaa
caacgcatcgccatcgctcgggcaatagtcagaaaccctaagatcctgcttctggatgag
gccacctctgcattggacacagagagtgaaaagacagtgcaggctgctttggatgaggcc
agacgtggacgcacctgcattgtcgtagcccacagactgtccaccatccagacggcagat
atcatagccgtcatgtcccaaggtgctgtcatagaaagggggacacatgaggaactcatg
gctaagagggctgcctactacaaactagtcacaacaggggctccgatcagctaa
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