KEGG   Coregonus clupeaformis (lake whitefish): 121552266
Entry
121552266         CDS       T08357                                 
Symbol
abcb11a
Name
(RefSeq) bile salt export pump
  KO
K05664  ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    121552266 (abcb11a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cclu02000]
    121552266 (abcb11a)
   04147 Exosome [BR:cclu04147]
    121552266 (abcb11a)
Transporters [BR:cclu02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB11 subgroup
    121552266 (abcb11a)
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121552266 (abcb11a)
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_22 RsgA_GTPase AAA_16 AAA_29 Rad17 AAA_15 AAA_7 Zeta_toxin AAA_21 DUF4804 ThiF
Other DBs
NCBI-GeneID: 121552266
NCBI-ProteinID: XP_041720980
LinkDB
Position
4:17355075..17365439
AA seq 1337 aa
MKDHIYQKKVTSLQDDTDKEYWQTKPDREEKGNEKGDGKKKQKLLDVGFFQLFRFATWKD
RLMMVVGGLCALVHGAASPLMLLVYGMMTNTFVAYELEVQELADPNKTCINNTITWINGS
IFEIAENTTVFCGVDIEAQMTMFAYYYVGIGLGVLIVSYFQIALWVSAAARQIQRIRKTY
FRKVMRMEIGWFDCNSVGELNTRISDDINKINNAIADQVSIFIERISTFIFGFMVGFIGG
WKLTLVVIAVSPLIGIAAGLMAMAVARLTGRELQAYAKAGAVADEVLSSIRTVAAFGGED
KEAERYDKNLIEAQNWGVKKGTIIGMFQGYLWCIIFLCYALAFWYGSKLVIETKELSPGT
LIQVFFGVLMAAMNLGQASPCLEAFASGRAAAKTIFDTIDREPEIDCFSEEGHKLDKVKG
DIEFHNVTFNYPSRPEVKILDSLSMLIRAGETTAFVGPSGSGKSTTVQLFQRFYNPKEGM
LTLDGHDIRSLNIQWLRSLIGIVEQEPVLFATTIADNIRYGRPGVTMDDIIQATKEANAY
NFIMDLPQRFDTLVGEGGGQMSGGQKQRIAIARALIRNPRILLLDMATSALDNESEAIVQ
EALDTARMGRTTITIAHRLSTIRNADVIIGFEHGRAVESGTHNDLLEKKGVYFTLVTLQN
QGNDMPNDKANIGPDNKTIEEEILQSFSRGSYESGLRQSLRLRSHTQLSNELIPDAIAGS
IKIKSDKFLATMENDMEPQRSKHSKEEAEERVEPAPVARILKYNKSEWPYMLLGSIGAAI
NGSVNPIYAILFSQILGTFSIRDLDEQRVQINGICILFCAVAVTSFFSQFLQGYAFGKSG
ELLTRRLRKVGFQAMLKQEVGWFDDPRNSPGALTTRLATDASMVQGATGSQIGMIVNSLT
NIGASFIIAFSFSWKLSLVVICFLPLIGLSGVFQVKMLTGFANEDKKAMEAAGQVSSEAL
ANIRTIAGLCKESTFVDTYEQQLEAPYMSAKKKANIYGICFAFAQCVIFMAYAASFRYGG
FLVSSERLHYLVVFRVISAIVISGTALGKASSFAPDYAKAKTAAAQFFKLLDRVPKISMS
QTDGEKWDDFKGELEFINCKFTYPTRPDIQVLNGLLVSVKPGQTLAFVGCSGCGKSTSVQ
LLERFYDPDEGRVLIDGRPSHTVNVPFLRAQIGIVSQEPVLFDCSIAENIQYGDNTRNMS
MEEIVDAAKKAYLHDFVMTLPDKYETQVGAQGSQLSRGQKQRIAIARAIVRNPKILLLDE
ATSALDTESEKTVQAALDEARRGRTCIVVAHRLSTIQTADIIAVMSQGAVIERGTHEELM
AKRAAYYKLVTTGAPIS
NT seq 4014 nt   +upstreamnt  +downstreamnt
atgaaggatcatatttaccagaaaaaggtcacttctctacaggacgacactgacaaagaa
tattggcaaacaaaaccagacagagaagaaaaagggaatgaaaaaggagatggaaagaaa
aaacaaaagctcttggacgttggattctttcaactgtttcgatttgcaacatggaaggac
agactgatgatggtagtcgggggcttatgtgctctagtccacggagcagcctcccctctc
atgctcctggtgtacggcatgatgacaaacacctttgtggcatacgagctagaggtccaa
gaactggcagaccccaacaaaacctgcattaacaacaccatcacctggatcaatggctcc
atatttgaaatagcagagaacacaacagtcttctgtggggtggatatcgaagcacagatg
accatgtttgcatattactatgttggtattggattaggagtcttgattgttagttatttc
caaattgccctctgggtgtctgctgctgccagacagatccagagaatcaggaagacttac
tttaggaaggtcatgcgaatggagattggctggtttgactgcaattcagttggagaatta
aacaccaggatatcagacgacatcaacaagatcaacaatgcgatagctgaccaggtgtct
atcttcatcgagaggatctccacttttatcttcggctttatggtggggttcattggagga
tggaagttgactctggtggtcattgcagtaagcccactaataggaattgctgctggacta
atggccatggctgttgccagactgacaggtcgggagctccaggcctatgccaaggcaggg
gcggtagctgatgaggtactgtcatccatcagaacagtggcagcctttggaggggaggac
aaggaggctgaaaggtatgacaaaaaccttattgaggctcagaactggggtgtgaaaaaa
gggacaatcattgggatgtttcaaggatacctgtggtgtatcatcttcctctgctatgct
ttggcattctggtatggctcaaaactggtcatcgaaaccaaagagctatcccctggtact
cttatccaggtattctttggagttctcatggcagctatgaacctgggtcaggcctcaccc
tgcctggaagccttcgcctcaggtcgagctgcagccaagaccatcttcgataccattgac
cgggagccagaaatcgattgtttctcagaggagggccacaaattagacaaggtcaagggt
gacattgaattccacaacgtcacatttaactacccctctcggccagaagtgaagatttta
gattctttgagcatgctgatcagagcaggagaaaccacagcttttgttgggccaagcgga
tcagggaagagcaccacagttcaactctttcagagattctacaaccccaaggaaggaatg
ttgactttggatggccatgacatccgcagcctgaacatccagtggcttcgctctctgatt
ggtatagtagagcaagagccggtgctgtttgccacaactatcgctgacaacatccgctac
gggcgacctggggtcaccatggacgatatcatccaggccaccaaggaggctaacgcctat
aacttcatcatggacctcccacagaggtttgatacgctggtgggtgagggtggtggtcag
atgagtggaggacagaagcagaggatcgctatcgcccgagctctgatccgcaaccccagg
atcctgctgctggacatggctacctcggctctggacaacgagagtgaggccattgtacag
gaggcacttgacacggctcggatgggcaggacaaccattaccatcgcccaccgcctttcc
actatccgcaatgctgatgtcattattggctttgagcacggaagggcagtggagagcggt
acacacaatgatcttctagaaaagaagggtgtctactttactcttgttacccttcagaac
caaggaaatgacatgcccaatgacaaagcaaacataggtccggacaataaaaccattgag
gaagaaatccttcagagtttcagtcgaggaagctatgaatctgggttgaggcaatctctt
cgcctgcgatctcacacccaactttcaaacgaactcatccctgatgctatagctggcagt
atcaaaattaaatcagacaaattccttgccacaatggaaaacgacatggaacctcaaaga
tcaaagcattccaaggaggaagcagaggaacgggtggagccagcaccagtggctcgaatc
ctgaagtacaacaagtcagagtggccctacatgctattgggatctataggagctgcaatc
aacggctccgtcaatccaatctatgctattttattcagccagatccttgggacgttctct
atacgtgacttggatgaacagagagtgcagatcaatggaatatgtatcctgttctgcgct
gtggcggtgacaagtttcttctctcagttcttacagggctatgcatttgggaagtctggg
gagctgctgacccgcaggctaaggaaggtgggcttccaggccatgttgaaacaggaggta
ggctggtttgatgaccccaggaacagcccaggagctctcaccaccaggctggccaccgat
gcctccatggttcagggggcaactggatcgcagattgggatgattgtgaactccttgacc
aacatcggagcgtctttcatcattgcgttctccttcagctggaagttaagcttggtagtg
atttgctttttaccactcattggcttgtctggggtcttccaagtcaaaatgctgacaggt
ttcgcaaacgaggataagaaggcaatggaagcagcaggacaggtgtccagcgaggctcta
gccaacatcaggaccatcgcagggctgtgcaaggagagcacatttgtggatacgtatgaa
cagcagctggaggctccctatatgtctgccaagaagaaggcaaacatctatggcatctgt
tttgcctttgctcagtgtgttatctttatggcgtacgccgcctcgtttagatatggaggc
tttcttgtcagctctgaaagattacattacctggtggtcttcagagtgatctctgccatt
gtgatcagtgggacagcactgggaaaagcttcctcattcgccccagattatgccaaagcc
aagactgcagctgcccagttcttcaaactgttggaccgagtccccaaaatcagcatgagt
cagacagacggggagaaatgggatgatttcaaaggggagttagaattcatcaactgcaag
ttcacatacccaacccggcctgacatccaggtgctaaatggactactggtgtctgtgaaa
ccgggccagaccctggcctttgtgggctgtagtggctgtgggaagagcactagtgtgcag
ctgttggagaggttctatgatccagatgagggcagagtgttgatcgatggccgtccatca
cacactgtcaacgtgcccttcctgagggctcagattggcattgtctcccaagagccagtg
ctgtttgactgcagtattgctgaaaacatccagtatggtgataacaccaggaacatgagc
atggaggagattgttgatgctgcaaagaaagcttatctccatgactttgtgatgactctg
ccagataaatatgagactcaggttggtgcccagggctcccagctctccagagggcaaaaa
caacgcatcgccatcgctcgggcaatagtcagaaaccctaagatcctgcttctggatgag
gccacctctgcattggacacagagagtgaaaagacagtgcaggctgctttggatgaggcc
agacgtggacgcacctgcattgtcgtagcccacagactgtccaccatccagacggcagat
atcatagccgtcatgtcccaaggtgctgtcatagaaagggggacacatgaggaactcatg
gctaagagggctgcctactacaaactagtcacaacaggggctccgatcagctaa

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