Coregonus clupeaformis (lake whitefish): 121552269
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Entry
121552269 CDS
T08357
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121552269
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
121552269
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
121552269
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GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
121552269
NCBI-ProteinID:
XP_041720979
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Position
36:complement(40621713..40648177)
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AA seq
545 aa
AA seq
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MMMTIADVINQLVEAHEEGKDINLNKVKTKCSAKYGLSAQPRLVDIIAAVPPHYRRALVP
KLKAKPIRTASGIAVVAVMCKPHRCPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTS
MRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALAEEYRDHFIRNLHDALS
GHTSNNVAEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDV
ARDTNRGHTVRAVCESFHFSKDAGFKVVSHMMPDLPNVGMERDVEQFIEFFENPAFRPDG
LKLYPTLVIRGTGLYELWKTGRYKSYSPSALVDLVARILALVPPWTRVYRVQRDIPMPLV
SSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWE
TFLSYEDPEQDILIGLLRLRRCSAQSFRPELKGGVSIVRELHVYGSVVPVSSRDPSKFQH
QGFGMMLMEEAERIATEEHGSGKLAVISGVGTRNYYRKMGYELEGPYMVKHLEVSVGRLG
NENLF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaccattgctgatgtcatcaatcagctggtcgaggcgcatgaagaaggaaaa
gacatcaacctcaacaaggtgaagaccaagtgctccgctaaatatggtctgtcagcccag
cctaggctggtagacatcatagctgctgttccaccccactaccgacgtgccctggtgcct
aaactcaaggctaaacctatccgcactgccagcgggatcgcagtagtggcagtgatgtgt
aaaccccatcgctgccctcacatcaacttcacaggaaacatctgtgtctactgtccaggt
gggccggactcagactttgaatactccacacagtcttacactggctatgagccgacatct
atgagagccatcagagcacgttatgatccctacctgcagaccagacaccgagtggaacag
ttgaagcagctgggccacagcgtggacaaggtggagttcatagtgatgggagggactttc
atggccctggctgaggagtacagagaccacttcatcaggaacctccacgacgccctgtca
ggacacacctctaacaacgtagctgaggccgtcaggtactcagaacgcagtaacaccaag
tgtgttggcatcaccattgagacgcgtcctgactactgtctgaagagacacctcagtgac
atgctggggtacggctgtacccggctggagataggggtccagagcgtctacgaggacgta
gcacgagacaccaacagaggtcacacggtgagggcggtgtgtgagtcgttccacttctct
aaagacgcaggtttcaaggtggtctcccacatgatgcctgacctccctaacgttggtatg
gagagggacgtggagcagttcatagagttctttgagaacccagcgttcaggccggatggg
ttgaagctgtacccaaccctggtgatcaggggtacgggtctgtacgagctgtggaagacc
ggccgctataagagttactccccgtctgccctggtggacctggtggctcgcatcctggca
ctggtgccaccctggaccagagtctaccgcgtccagagggacatccccatgcctctggtg
agctctggagtagagcatggtaacctcagagagctggctctggccaggatgaaagacatg
gggaccgagtgtcgagatgtgagaacaagagaagtgggtatccaggagatccatcacaaa
gtgcgtccctaccaggtggagctgatccgtagagactacgtagccaacggtggctgggag
accttcctgtcgtacgaggacccagaacaggacattctgattggtctgctgcgtctgcgg
cgctgttccgcccaatcgtttcgccccgagctgaaagggggcgtgtctattgtgcgtgag
ctgcacgtctacggcagcgtggttccggtcagcagccgagaccccagcaagttccagcac
cagggcttcgggatgatgctgatggaggaagcagagcggatcgccacagaggaacacggc
tccgggaaactagccgtcatctcaggtgtgggaactaggaactactacaggaagatgggt
tatgagctggagggaccatatatggtgaaacacctggaggtgtctgtaggcagactgggg
aatgaaaacctgttttag
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