Coregonus clupeaformis (lake whitefish): 121552281
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Entry
121552281 CDS
T08357
Name
(RefSeq) DNA repair protein RAD51 homolog A
KO
K04482
DNA repair protein RAD51
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03440
Homologous recombination
cclu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121552281
03460 Fanconi anemia pathway
121552281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121552281
04121 Ubiquitin system [BR:
cclu04121
]
121552281
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121552281
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121552281
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121552281
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
121552281
RecA family proteins
121552281
FA (Fanconi anemia) pathway
Other FA pathway factors
121552281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
HHH_5
ATPase
AAA_22
AF1548-like_C
HHH
PAXNEB
Motif
Other DBs
NCBI-GeneID:
121552281
NCBI-ProteinID:
XP_041721010
LinkDB
All DBs
Position
36:10567823..10571836
Genome browser
AA seq
338 aa
AA seq
DB search
MAVRSEARVEAEVEEEESFGPQPLSRLEQCGISASDLKKLEDAGFHTIEAVAYAPKKELL
NIKGISEAKADKVLAEAAKLVPMGFTTATEFHQRRAEIIQVSTGSKELDKLLQGGIETGS
ITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLV
GSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELAAR
QGHLGRFLRMLLRLADEYGVAVVITNQVVAQVDGAAMFSADPKKPIGGNIMAHASTTRLY
LRKGRGETRICKIYDSPCLPESEAMFAINADGVGDAKD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaggagcgaggccagggtggaggcagaggtagaggaggaggagagttttgga
ccacagccactgagcagacttgagcaatgtggcatcagtgccagtgacctaaagaaactg
gaggatgcaggcttccacaccattgaggcagtggcctatgcccccaagaaggagctgctt
aacatcaaggggatcagtgaggccaaagcagacaaagtcctggctgaagctgccaaacta
gtgcccatgggcttcaccacagcaacagagttccaccaacgccgagctgaaatcatccaa
gtctccactgggtctaaagagctggacaagctgctacagggtgggatagagacaggctcc
atcacagaaatgtttggagagttccggacaggaaagacacagctgtgccacacccttgca
gtcacctgtcagttgcccattgaccagggtggtggagagggcaaagccatgtacattgac
acagaggggaccttcaggccagagaggttactggctgtagcagagaggtatggacttgtt
gggagtgacgttctggacaacgtagcctacgctagggcctttaacacagaccaccagacc
cagctgctttaccaagcctcagccatgatggcagagtccaggtatgccctgctgatagtg
gacagtgccacagccctctacaggactgactactccgggaggggagagctcgctgcacgg
caaggccacctgggacgcttcctgagaatgctgctgaggctagcagacgagtatggcgtt
gccgtggtgataaccaatcaggtggtggcccaggtagacggtgctgccatgttctcggca
gaccctaaaaaacctatcgggggcaacatcatggcacatgcctccactacgcgactgtac
ttgaggaaaggccgtggggaaacgaggatctgcaaaatctacgactcgccctgccttcca
gagtctgaagccatgtttgccatcaacgcagatggggtgggcgacgccaaggactga
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