Coregonus clupeaformis (lake whitefish): 121552310 Help Entry 121552310         CDS       T08357                                  Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03040   Spliceosome Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     121552310  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cclu03041]     121552310 Spliceosome [BR:cclu03041]  Complex C   Other components    Step II factors     121552310 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 EIF3I WDR55 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41 PQQ_2 Motif Other DBs NCBI-GeneID:  121552310 NCBI-ProteinID:  XP_041721050 LinkDB All DBs Position 36:complement(20714461..20733751) Genome browser AA seq 575 aa AA seqDB search MAATLVSYGSDSDSDNETTSDVNPEKIDPDALAHLQPLKYGQTMSLAVLNSAPEVAVKEA VETGIHLDPSLKEVNYNPTYETMFAPEFGPVNPYKSQQMAAPRNMLSGYAEPAHINNFMF EQQRRTFSTFGYALDPSVDTSQNSSNSYIGAVDEAEKKKGLTVFEVGPKQTDKRKKVQGG GADDLDNYLGPWAKYVDEKDSAKPSEEEQKELDEITAKRQKKGRNEEEAPAEEKTILHVK DAYDYQGRSYLHVPQDVGINLRTADIPDKCYLPKKQIHVWSGHTKGVSAIRLFPVSGHLL LSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDICFNNTGTQYMSAAYDRYLKLWDTETG QCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDVRTGEVVQEYDRHLGAVNTI TFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQ ILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYH RIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD NT seq 1728 nt NT seq  +upstreamnt  +downstreamnt atggcggccaccctcgtttcgtacgggagcgattcagattcagataatgagacaacatct gatgttaatcccgaaaaaattgaccctgatgctttggcacatcttcaaccgttgaaatat ggccaaacaatgtctttggctgtcctcaattcagctcctgaggtcgccgtaaaggaggct gtggagactggcatacatctggacccttctctcaaggaggtcaactacaaccccacatat gaaaccatgtttgcgccagagtttggtcccgtcaacccatataaaagtcaacagatggct gcgcccaggaatatgctgtctggctatgcagagcctgctcacatcaacaactttatgttt gaacagcagaggaggaccttctccacatttggctatgctctggatccgtctgtggataca agccaaaattcctccaatagctacatcggtgcagtagacgaggcagagaaaaagaaagga ttgactgtgttcgaggttggcccaaagcagactgacaagaggaaaaaggtgcaaggaggt ggagcggatgaccttgacaactacctcgggccctgggcgaaatacgtggacgaaaaggac agcgccaaaccatcagaggaggaacagaaggagctggatgagatcacagccaagaggcag aagaaaggaaggaacgaggaagaggctccggcagaggagaagaccattctccatgtcaaa gacgcgtacgactaccaggggaggtcatacctccacgtaccccaagatgtgggcatcaac ctgcgtactgcagacatcccagacaagtgttacctgcccaagaaacagatccacgtctgg tctggacacaccaagggggtcagtgccatccgtctgtttcctgtatcaggtcacctgctg ctctcctgctctatggactgtaagatcaagttgtgggaggtttataacgagaggaggtgc gtacggacctttatcggccacagtaaagcggtgcgggatatttgcttcaacaacactggg actcagtacatgagtgcagcttacgaccgctacctcaaactctgggacactgagactggc cagtgcatctcccgcttcaccaacagaaaggtgccgtactgcgtcaagttcaacccagat gaggacaagcagaatctgtttgtggctggcatgtctgataagaagattgttcagtgggac gtgaggacaggagaagtggttcaggagtacgaccgtcacctgggagcggtcaacaccatc acgttcgtggatgagaaccgccgtttcgtcagcacgtctgacgacaagtccctccgcgtg tgggagtgggacattcccgtggacttcaagtacatcgcagagcccagtatgcactctatg cctgctgtaacactctcacccaatggtaagtggctggcctgccagtccatggacaaccag atcctgatctttggagcccagaaccgtttccgtctgaacaagaagaagatcttcaagggc cacatggtggctggctacgcatgccaggtggacttctccccagacatgagctatgtggtg tctggcgatgcggatgggaagctgaatatctgggactggaagaccaccaagctgtatcac cggatcaaggcccacgacaaggtgtgcatcagcgccctgtggcatccgcacgagacttcc aaggtcatcacctgtggctgggacggacagatcaaactctgggactag

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