Coregonus clupeaformis (lake whitefish): 121552312
Help
Entry
121552312 CDS
T08357
Name
(RefSeq) protein SOGA3 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121552312
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121552312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
YabA
APG6_N
Cnn_1N
TSC22
Halo_GVPC
Motif
Other DBs
NCBI-GeneID:
121552312
NCBI-ProteinID:
XP_041721051
LinkDB
All DBs
Position
36:11493586..11505008
Genome browser
AA seq
660 aa
AA seq
DB search
MHTKADSAPGAEAAPEPAIGTIEAEFVTPQEEGLDDELERLVDENEDLKMEIEEMRTEMD
EMRDTFYEEDTCQLQEMRRELERANKNCRILQYRLRKAERKKLRYAQTGEIDEELLRSLE
QDLKVAKDVSVRLHHELENVEEKRTKTEDENENLRQKLIEVEVTKQALQNELDKVRESQK
KRGSKEVQKSDKKPAQTPTEDDNDDLKCQLAFIKEEAVLLRKKTAKIDKEKDRLETELQK
YRSFYGDLDSPHPKGEAGGPPTTRESELKLRLRLVEEEANILGRKIVELEVENRGLRAEL
DDLRGEGEGEGGSGGGAVGGVGSGRGHGEAMTELRQQLQLVEDEAELLRRNLADAEDHNK
RVTGELNKLRFKAGTHEGGARHGGGAPGAGGVCSEKAEALQEELKTARLQINDLSGKVMQ
LQYENRVLLSNMQRYDLASNLALRGGISPWDRDAESDAGGTSPSGRRESDDDSSSSRLLP
PHRKREGPVGGESDSDEVRNQTRCLTPTRGLYTPTPETAARFLPRSLRDRQQMIDIRVEA
ERLGRTIDRLITDTATIIAEARVYVSNSNLYGRGEEEEGGGGIREHELLYRINAQMKAFR
KELQGLIDRLEVPKPEDREEEPLSMFQPIILLILILVLFSSHSYATIFKLVFLFTLFFVL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccaaggctgacagcgcgccgggcgccgaggccgcgccggagccggctataggg
accatagaggcggagttcgtgacaccgcaagaagagggccttgatgacgaactggagaga
ctggtggatgagaatgaagatctaaagatggagatcgaggagatgaggacggagatggac
gagatgcgtgacaccttctatgaggaggacacgtgccagctgcaggaaatgaggcgcgag
ctggagcgagccaataaaaactgccggatcctccagtaccggctgaggaaggctgagagg
aagaagctgcgctacgcccagacaggagagatcgacgaggagttactgaggagcctggag
caggacctgaaggtagcgaaggatgtgtctgtgagactgcaccatgagctggagaatgtg
gaggagaaacgcacaaagacagaggacgagaatgagaatctgaggcagaaactcatcgag
gtggaggtgaccaaacaggcacttcagaatgagctggacaaagtcagggagtctcagaag
aaaagaggaagcaaggaggtccaaaagtcagacaagaagcctgcccagaccccaacagaa
gatgacaacgatgatctcaagtgccaactggccttcatcaaagaggaggctgtgttgttg
aggaagaagacagctaagatcgacaaggagaaggaccggctggagacggagctacaaaag
taccgctccttctacggggacctggacagcccccaccccaagggtgaggccgggggaccc
cccaccacccgtgagtccgaactgaagctgcgtctgcgcctggtggaggaggaggctaac
atcctggggaggaagatcgtggagctggaggtggagaaccggggtctgagggcggagttg
gatgacctcaggggtgaaggggagggagaaggcgggtccggtgggggggctgtgggcggg
gtggggtcgggccggggccacggggaggccatgacagagctgaggcagcagctgcagctg
gtggaggacgaggcagagctactaaggaggaacctggctgacgctgaagatcacaacaag
agggtgacgggagaactaaacaagctcaggttcaaggccgggacccacgagggaggtgca
aggcatggaggaggggcgccaggagcaggaggagtatgctcggagaaggcagaggcactg
caggaggaactgaagactgcccggctacagattaatgatctcagtgggaaggtgatgcag
ctgcagtatgagaaccgtgttctgctctccaacatgcagcgctacgacctggcctccaac
ctggcccttagggggggcatcagcccttgggacagggatgcagagagtgacgcaggtggg
accagcccaagtgggcgccgcgaaagtgatgatgactcctcctcctctcgcctcctgccc
ccgcaccgcaaacgcgagggcccagtgggcggggagagtgactcggacgaggtgcggaac
caaacccgctgcctcacgcccacccggggtctctacaccccaaccccagagaccgccgcc
cgcttcctgccccgcagcctacgggatcgccagcagatgattgacatacgggtggaggcg
gagcgtcttggcaggaccatcgaccggctcatcaccgacacggcaactatcatcgcagag
gcgcgggtgtacgtttccaacagcaacctgtatgggcggggtgaggaggaggaggggggt
ggggggatcagggagcatgagctgctgtacaggatcaatgcccagatgaaggccttcagg
aaggagctacaaggcttaatagacagactggaggtgcccaaacctgaggacagggaggag
gagccactgtcgatgtttcagcccattattttactcatcctcatcctcgtcttattctcc
tcccactcttatgccaccatctttaaacttgtctttctgtttacccttttctttgtcctg
tga
DBGET
integrated database retrieval system