Coregonus clupeaformis (lake whitefish): 121552313
Help
Entry
121552313 CDS
T08357
Name
(RefSeq) GDNF-inducible zinc finger protein 1
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121552313
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121552313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-C2H2_16
zf-C2H2_6
zf-C2H2_PRDM15
C2CH-3rd_BIRD-IDD
zf-C2H2_8
zf-met
DUF7128
Zn_ribbon_8
C1_4
Motif
Other DBs
NCBI-GeneID:
121552313
NCBI-ProteinID:
XP_041721055
LinkDB
All DBs
Position
36:23230978..23235792
Genome browser
AA seq
879 aa
AA seq
DB search
MSDQVVQLSSAFHHEDMLQSLHQLRLHGHLCDVTVQVDFQGELEEFEAHQVVLAASSGYF
KNILLAPDPPKKLFLGNVRTTDFTRFLEYVYTGKLEVDKEFAKDKIGVIHEVATLLECKS
LVQACCSVLDEGSLSPHRAETSMSQDKEADLDDVEEEEGALGVEVNKVPKIASTKRLTSP
TKPERGERSLKRAKVTVTAEEERSEVNKDTEVSGRRSNRLAGRRVFVDIPKKKYVRKMKD
QTKMQMEDLHDNNTQTTSQEENTDNTQEAEEALPELLPEKEGAGLESTDVDDEDEVEEGD
IPQDCPDDSLFFPSKEEEGEEEGEERATNRSSRRIDTQYKCDKCQRTFHYEKSYLKHIKT
SHSVQGEVTYRCDTCQQTFANRCNLKIHQRHVHSDERLFPCDVCTKTFKRKKDVTRHRRQ
VHEGGGERHTCLVCNKALSSKTALTLHERTHTGDKPYSCTDCEAKFSQSSALKTHRRTHT
GEKPFACDQCDARFTQNHMLSYHKRAHTGEKPFMCESCGKSFASKEYLKHHSRIHTGSRP
YKCEQCGRAFAQRNSLHQHMKIHTGERPYHCTDCDKQFTQLNALQRHQRIHTGEKPYMCG
LCNRTFTDKSTVRRHTMTHDQNTPWKNYLVVLKDNVEEKTKKPRGLGRKVKMETVVQEVE
GDSGAGGRLQEGTILVPGEPITLSANWGDPGTIALVSHTTLGGFTVIQTEMPAGTQLPIV
TTDGTGASVISLDGSTVSVPFTIPVSMSSIPVTSSSSGPLPVQTVSLSVPVTVSGAIFAP
VSVSETTLSTSSVLETAVSQTILAPDLEAGPGSDMTAIMDPEEAVSECAPISEECVTVQT
SELETETQTAAVSNEEQHSVPEDIGTVEDIEVSTEDTVV
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaagtggtccagctctcctcagccttccaccatgaggacatgcttcagtct
ctgcaccagctccgactgcatggccacctgtgtgatgtcacagtccaggtggacttccag
ggtgagctggaagagttcgaggctcaccaggtggtcctagctgcctccagcggctacttc
aagaacatcctactggccccggacccacccaagaaactattcctggggaacgttcgaacc
actgatttcaccaggttcttggaatatgtatacactggcaaactggaggtggataaagag
tttgctaaagacaagattggtgtaatacatgaagtggcgacacttttggagtgtaagagc
cttgtccaggcttgctgctcggttctcgatgaaggcagcttgagtccgcacagggctgaa
acatccatgtcacaagacaaggaggctgatttggatgatgtagaagaggaggagggggcg
ctgggggtcgaagtaaacaaagttcccaaaatagcctccaccaaaaggctgacctctcca
acaaaaccagagagaggggagaggagtttgaaaagggcaaaggtcacggtcacagccgag
gaggagaggtcagaggtgaataaagacactgaggtctctgggagaaggagtaacaggctg
gcagggcgcagagtcttcgttgacattcctaagaagaagtacgtgaggaagatgaaggac
cagaccaagatgcagatggaagatctgcatgacaacaacactcagacaaccagtcaggag
gagaacactgacaacacacaggaggcagaagaggcccttccagagctgctgcctgaaaaa
gagggggcgggactggaatcaacagacgttgatgatgaagatgaggtggaagagggagat
ataccacaggattgtccagatgactccctcttcttccccagcaaggaagaggagggcgag
gaggaaggagaggaacgtgccaccaacagatcatccagacgtattgacacccaatacaag
tgtgacaaatgtcaacggaccttccactatgagaagagctacctgaagcacatcaagacg
agccacagtgtgcagggggaggtgacttaccgttgtgacacctgccagcaaaccttcgcc
aaccgctgcaacctgaagatccatcagagacacgtccacagtgacgagagactgttcccc
tgtgatgtctgcaccaagactttcaaacgcaagaaggacgtgacacgccaccgacgacag
gtgcatgagggaggtggtgagcggcacacctgtcttgtgtgtaacaaggctttgagctct
aagacagcgttgacgctacatgagagaacacacacaggagacaagccctactcctgcact
gactgtgaagccaagttctcccagagctcagccctcaagacacaccgcaggactcacaca
ggagagaagcctttcgcctgtgaccagtgtgatgcgaggttcacccagaaccacatgttg
tcctatcacaaaagggcccacacaggagagaagccttttatgtgcgagagctgtgggaaa
agctttgcctctaaagaatacctgaaacaccactccagaatccacacaggctccaggcct
tacaagtgtgaacaatgtggtcgggccttcgcccagagaaactccctccaccagcatatg
aagatacacacaggtgagcgcccgtaccactgtacagattgtgataagcagttcacccag
ctgaatgccctccagaggcaccagaggattcatacaggggagaagccctacatgtgtggc
ctctgcaaccgtaccttcactgacaagtccactgtacgaagacacaccatgactcatgac
caaaacactccatggaagaactacctggtggtcctcaaggacaacgttgaggaaaagact
aagaaacccagaggccttggtagaaaggttaaaatggagacggtggttcaggaggtggaa
ggggatagtggagctggaggtaggctccaggaggggaccatattggttcctggtgagccc
atcacactctcagccaactggggcgacccagggaccatcgccctggttagccacaccacc
ctgggtgggttcacggtcatccagacagaaatgccggcagggacccagctacccatcgtc
accacagacggcaccggggccagtgtcatctctctggatggatccactgtctctgtcccc
tttactatccctgtctctatgtcctccatccctgtgacctcgtcctcctctggtcccctc
cctgtccagactgtgtctctctctgtccccgtcactgtctcaggggccatatttgcccca
gtttcagtttcggagaccactctttcaacttcatccgtgctggaaactgcggtgtcgcag
accatcttggctccagatttggaagctgggcctggttcagatatgacggccattatggat
cctgaggaggcagtttcagagtgtgcccctatctctgaggagtgtgttacagtgcagaca
tcagaactggagactgagacacagacagctgctgtctctaatgaggaacaacacagtgta
ccagaggacataggtactgtggaagacattgaggtgtccactgaagatactgtggtgtag
DBGET
integrated database retrieval system
