Coregonus clupeaformis (lake whitefish): 121552320
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Entry
121552320 CDS
T08357
Symbol
esr2a
Name
(RefSeq) LOW QUALITY PROTEIN: estrogen receptor 2a
KO
K08551
estrogen receptor beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121552320 (esr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121552320 (esr2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121552320 (esr2a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121552320 (esr2a)
Nuclear receptors [BR:
cclu03310
]
3. Estrogen like
3A. Estrogen receptor
121552320 (esr2a)
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GFIT
Motif
Pfam:
zf-C4
ERbeta_N
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121552320
NCBI-ProteinID:
XP_041721071
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Position
36:complement(12595043..12638248)
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AA seq
602 aa
AA seq
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MSQYRRLPGLTSELPQSPMAASPLPERDSAPLLQLQEVDPSRVGRGGRILSPIFSAPSPP
LPMEAHPICIPSPYTDIGHDFNPLSFYSPTLLSYGGPALPDCPSARQSLSPSFFWPPHAH
VGPSLALHHRPQSRPQQGQPTRVPWVELSPRDHALSESSKPLRKRSQEGEETVISPEGKA
ELHFCAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQAC
RLRKCYEVGMTKCGMRRDRSSYRGHQPRRVGRFSRGAASGPKRALAERGEPIKELLPPAL
TPEQLIGRIMEAEPPEIYLQRDMRRPLTEANVMMSLTNLADKELVHMISWAKKIPGFVDL
SLFDQVHLLECCWLEVLMLGLMWRSVDHPGRLIFSPDLSLSRDEGSCVQGFVDIFDMLLA
ATSRFRELKLQREEYVCLKAMILLNSNMCLSSSEGSEELQSRSKLLRLLDAVTDALVWAI
AKTGLSFQQQSARLAHLLMLLSHIRHVSNKGMDHLHCMKMKNIVPLYDLLLEMLDAHIMH
SPQLPQQATXRGPLSRGEPPAAHHPSSCPTQTWTPSSGGEPQEQEPLDCRDPGRKTVVIR
DL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatatagaagactccctggcctgacttcagagctcccgcagtcgccaatggct
gcgtctccactcccagagcgcgattctgcgccccttctgcagctgcaggaagtggacccc
agccgggtgggccgcggtggccgcatcctctcgcccatcttcagcgccccatccccgccg
ctgcccatggaggcccaccccatctgcatcccctccccgtacactgacatcgggcacgac
ttcaaccccttgtccttctacagccccactctgctgagctacggtgggcccgccctccct
gactgcccgtccgctcgccagtccctcagtccctccttcttctggcccccccatgctcac
gtggggccttcattggctctgcaccatcggccccagtcccgcccccagcaaggccagcca
acccgagtgccctgggtggagctgtcgccccgggaccacgccctatctgagagcagcaag
cctctgaggaagcgctcgcaggagggcgaggagacggtcatctcgccggaagggaaggct
gaactgcacttctgtgccgtgtgtcacgactacgcatcgggctaccactacggcgtgtgg
tcctgcgagggctgcaaggctttcttcaagaggagcatccaaggtcacaatgactacatc
tgcccggcgaccaaccagtgcactatcgataagaaccgccgcaagagctgccaggcgtgc
cgcctccgcaagtgctacgaagtgggcatgacaaagtgtggcatgcgtcgcgaccgcagc
agctaccggggtcatcaaccgaggcgcgtgggtcgcttctcccggggcgcggctagtggg
cccaagcgggccctagctgagaggggcgagccaatcaaggaactcctccccccagcatta
accccggagcagctgattggccggataatggaggcggagccaccggagatctacctccag
agggacatgaggaggcccctgacggaggccaacgtcatgatgtcactcaccaacctggcc
gacaaggagctggtccacatgatcagctgggccaagaagatcccagggtttgtggacctg
agcctgttcgaccaggtgcacctgttggagtgctgctggttggaggtgctgatgctgggg
ctcatgtggagatcagtggaccaccccggtaggctcatcttttcccctgacctcagcctg
agcagggacgaggggagctgtgtgcagggtttcgtggatatctttgacatgcttctagct
gccacctccaggttcagagagctcaagctgcagagggaggagtatgtctgcctcaaggcc
atgatcctcctcaactctaacatgtgcctgagctcctcggaggggagcgaagagctgcag
agtcgctcgaagctcctgcgcttgctggatgccgtaacagacgcactggtgtgggccatc
gcaaagacgggcctcagctttcagcagcagtctgcgcgcctcgcccacctgctgatgctg
ctgtcacacatccgccacgtcagtaacaagggcatggaccacctgcactgcatgaagatg
aagaacattgtgcccctgtacgacctgctcctggagatgctggacgcccacatcatgcac
agccctcagctgccccaacaagccaccntcagggggccactgtccagaggtgagccccct
gcagcccaccaccccagcagctgccccacccagacatggacccccagcagcggaggcgag
ccccaagaacaggagccattggactgcagggaccccggtagaaagacagtggtgataagg
gatctctag
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