Coregonus clupeaformis (lake whitefish): 121552398
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Entry
121552398 CDS
T08357
Symbol
matn3a
Name
(RefSeq) matrilin-3a isoform X1
KO
K19467
matrilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121552398 (matn3a)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
121552398 (matn3a)
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GFIT
Motif
Pfam:
VWA
Matrilin_ccoil
VWA_2
FXa_inhibition
cEGF
EGF_LRP2
EGF_CA
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
121552398
NCBI-ProteinID:
XP_041721222
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Position
36:33356409..33364156
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AA seq
551 aa
AA seq
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MKSLFGNLVYCLFLFVSDVYGTYRLNGFDPLQVTAQSYAQRRNLARPPLRTLDPSVHASA
YRHRGYHYHHQPPGIHLPVVYHQPVPLSPPVAYHRPSVPLPPYQHRFKGPAPPVVYNLYQ
DLSPPVVHHHPFKGFFPPVSHHHKFKGPCPQTLPLVQPKPTTVPTTSVVYLPTTVPTLPP
VTTLQPVMTTLPLEVTTNPVPPTLPVSTQSGVITTTSVKTVTDNSCRSRPLDLVFIIDSS
RSVRPGEFEKVKIFLADMVDTLDVGPEATRVAVVNYASTVKIEFLLKAHLNKPNMKQAIT
RIEPLAAGTMTGLAIKSAMTKAFTEESGARPKSKNIAKVAIIVTDGRPQDQVEEVSAAAR
GSGIEIYAVGVDRADMTSLRLMASNPLEDHVFYVETYGVIEKLTSKFRETLCGWDPCDMG
HDCEDICVSSSSNNSYHCRCREGYLLNTDKKTCSQSQKRVDPCAMGHDCEHICVSGNASY
HCTCRKGYILNLDQKTCALKQVKVVVVEDPCKCEARLAFQMQTQAALQEITARLADMTGR
VEQIENILGPV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttattcgggaatctcgtctactgccttttcctctttgtgtctgatgtatac
ggaacgtaccgtttgaatggattcgatccactgcaggttactgctcaaagttatgcacaa
cgcagaaatcttgcccggccaccgctgcggacgctcgatccttcagttcacgccagtgca
tacaggcatagaggctatcactaccaccaccagccaccagggatccacctgcccgtggtt
taccatcagcctgtccctctatctccaccggtggcttaccacagaccctctgtccccttg
ccaccttaccaacacagattcaaagggccagcgccaccagtggtgtacaacctatatcaa
gacctttcacctccagtagttcaccaccacccatttaaaggattttttccaccagtgagc
caccaccacaaattcaaaggtccatgtccacaaactttacctctggtacagcctaagcct
actacagtgccaacgacctctgtggtgtacctacccaccacagttccaactctaccacca
gtaacaaccttgcaaccggtgatgaccaccttgccactggaggtgaccaccaaccccgtg
ccgccaacgctaccggtcagtacccaaagcggcgtcatcaccaccaccagtgtgaagaca
gtgacagacaattcgtgcaggagccgtcccctggacctggtcttcatcatcgacagctcc
cgcagcgtgcgccccggcgagtttgagaaggtcaagatcttcctggccgacatggtcgac
accttggacgtgggaccagaagccacccgcgtggccgtggtcaactatgccagcacagtc
aagatcgagttcctgctcaaggctcacctgaacaagcccaacatgaagcaggctatcacc
cgcatcgagcccctggccgccggcaccatgactggcctggccatcaagtcggccatgacc
aaggccttcaccgaagagtcgggcgcccggccgaagtcgaagaacatcgccaaggtggcc
atcatcgtgacagacgggcgtcctcaggaccaggtggaggaggtgtcagcagctgcccgg
gggtctggcatcgagatctacgcggtgggggtggaccgcgccgacatgacctctttgcgg
ctgatggccagcaaccctctggaagaccacgtgttctacgtggagacctacggcgtcatc
gagaagctcacctccaaattcagggagaccctgtgtggttgggacccctgtgacatggga
cacgactgtgaggacatatgtgttagcagcagcagcaacaactcctatcactgcaggtgt
cgggaggggtatctcttgaacacggacaagaaaacatgttcccagagtcagaaacgtgtg
gacccctgtgccatgggacacgactgcgagcacatatgtgtcagcggcaacgcgtcctat
cactgcacgtgtcggaagggctatatcttgaacctggaccagaaaacgtgtgccctgaaa
caggtgaaggtggtggtggtggaggacccctgtaagtgtgaggccagactggctttccag
atgcagacacaggccgcactccaggagatcactgccagactagctgacatgacaggaaga
gtggaacagattgagaacattttgggtcctgtctaa
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