Coregonus clupeaformis (lake whitefish): 121552452
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Entry
121552452 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121552452
Enzymes [BR:
cclu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
121552452
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121552452
Prokaryotic type
121552452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
121552452
NCBI-ProteinID:
XP_045072565
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MTMKEEAPSVPECYISEHEGFYGTIKNSTRDFIVTEIDIHGQMVTKPSVSDVPQSSNIIE
ACPGAKSERKKNIISPKHQHNLKEEKCTPVVKDVDSEPGPGQNGDITSTPSQDCFDLSLI
LGQSVCEELEQFTALLREASSSPNDGVEKKLANQESSNGSEKKMANQELSLGSFPDKHQR
ANVHRAVRHNFPFLLTVTNQSEIRVKEDPDFKLLSGLVSEEEAEDFFRFIDTKMPNSVYT
FRGDDSKEHRTAVHHFLSRRFGKLVETKSFSDQQQKTTAITVRLRGKGKPRKRMADDSKG
EEVYTAFTLRKENLETLEATSYMAAVLGVLLSDFTYAGIKDKRAVTYQSMVVKKISPQRL
REKASEFEKRGMVLSSVRSVPEPLHLGRLQGNHFDLVVRDLRPHQGHDTLMELDSLVQEA
VENVKVRGFVNYYGPQRFGTGQSVQSDSXGLALLKEEMVAAVHLFFTPEEGDDPQSVAKR
HFLQTDNAKEALSLMPMSKARERLMLRALHRYGTGPEGCTRAWLSLPHGMRVFYPHAYCS
QPGLNEAAAHRLTTLGHRARQGDLVWKQRGEEGIEMGEPSLPQIHVVTAAEEEEEVYSLG
QVVLPMLGSSVKYPENPVGGWYQERLARDGLQSCRFRVTPLKLNLPGCYRPLLAIPRNLT
YRLEQGQRAGERQQESNGKSPQASGAVPQHPGADTTRPAGLERQKGGESVQGNGEGKSAV
QYPDTDTPSLTLNFDLDSSCYATVCLREVMKCDP
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaggaggaggcaccgagtgtccctgagtgctacatctcagaacatgaaggg
ttctatggaaccatcaagaactccaccagagactttatagtcacagagatagacatccat
ggccagatggtcactaaacccagtgtatctgatgttcctcaatcatccaacattattgag
gcatgcccaggtgccaagtctgaaagaaagaaaaatattattagcccaaaacatcaacac
aacctaaaagaagagaaatgtactccggttgtaaaggatgtggattcagaacctggaccg
ggtcagaatggtgacatcacatccacccccagccaagactgttttgacctgagcttgata
ctgggtcagtctgtctgtgaagagctagagcagttcactgctttattgagagaggcgtca
tcaagtcccaatgatggcgttgagaagaagttggccaaccaagaatcatccaatggcagt
gagaagaagatggccaatcaagagttatccctgggttcattcccagacaaacaccaaaga
gctaacgtccaccgcgctgtccgacacaacttccccttcctgttgacagtaaccaaccaa
tcagagatcagggttaaggaggaccctgactttaagcttctgtcaggtttggtctcagag
gaggaggccgaagactttttcaggttcatcgacaccaagatgcctaactctgtgtacacg
ttcaggggtgacgacagtaaggagcacaggacggcagtgcaccacttcctaagtagacgg
tttggtaaactggtggagaccaagagcttcagtgaccagcagcagaagactacagccatt
acggtgaggttgagaggaaaagggaaacccaggaagaggatggctgatgatagtaaaggg
gaagaggtctatacagcgttcactctgaggaaggagaacctggagactctggaggctacc
agctacatggcagctgtcctgggggtgctgctctctgacttcacctacgctggcatcaag
gacaagagggccgtcacctaccagtccatggtggtcaagaagatctcaccacaacggctg
agagagaaggccagtgagtttgagaagagggggatggtcctctcctccgtccgctccgtc
cctgagcctcttcatctgggtagactccaggggaaccactttgacctggtggtacgggat
ctcagaccacaccagggtcatgacacactgatggagctggactcactggtgcaggaggct
gtggagaacgtcaaggtcagggggtttgtgaactactatggacctcagaggtttgggact
ggacagagtgttcaatctgacagcngcggactggccctgctcaaagaggaaatggtggca
gctgtccatctgttcttcacaccagaagagggtgatgaccctcagagcgttgccaagaga
cacttcctccagactgataatgctaaggaggccctgtctctgatgcccatgtccaaagcc
agagagaggctgatgctgagggccctacatcgctatgggacgggcccagagggctgtact
cgtgcctggctcagcctgccccatgggatgagggtcttctacccccacgcgtactgtagt
cagccgggtctgaacgaggcggctgcacacaggctgaccacgctgggccacagggccagg
cagggagatctggtctggaagcagaggggagaggaggggatagagatgggagaacccagc
ttacctcagattcatgttgttacggctgcagaggaggaggaggaagtctactcactagga
caggtggttcttcccatgcttggcagcagtgtgaagtacccagagaaccctgtaggggga
tggtaccaggagagactggcgagggacggactacagagctgtcgtttcagagtcactcct
ctcaaactgaacctccctggctgctaccgccccctactggccatcccacgtaacctcacc
tataggctggagcagggccagagagctggggagaggcaacaggagagtaatggaaagtcc
ccacaggctagtggagcggtaccacagcaccctggcgcagacacaaccaggcctgcaggt
ctggagaggcagaaaggaggggagagcgtgcaggggaatggagaggggaagtcagcggtg
cagtaccccgacacagacacacccagcttgacgttgaactttgacctggactcttcctgc
tacgccaccgtctgcctcagagaggtcatgaaatgtgacccttag
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