Coregonus clupeaformis (lake whitefish): 121552455
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Entry
121552455 CDS
T08357
Name
(RefSeq) homeobox protein Nkx-2.2a-like
KO
K08029
homeobox protein Nkx-2.2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121552455
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121552455
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7312
Motif
Other DBs
NCBI-GeneID:
121552455
NCBI-ProteinID:
XP_041721327
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All DBs
Position
36:35243859..35246398
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AA seq
260 aa
AA seq
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MSFNNTKKGFSVKDLLDLPDTNGGSGTEETEDENEEETSEIMTQNPSFENAGNVPCKSLL
CDGGGNSYSRWLASSNSIQYSLHGLSVDSRNEPKSPELSVDESQDIDRDSSDSGKKRKRR
VLFSKAQTYELERRFRQQRYLSAPEREHLANALRLTQTQVKIWFQNHRYKMKRARAEKGM
EMVHLVSPRRVAIPVLIRDGKPCDTSKTQELEASFRAGIPLSAYSAYSLHHMHMRSHYSP
DAMSQLPSLHHLAQMYQWTW
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaacaacacaaagaagggcttctctgtaaaggaccttctggatcttcctgac
accaatggaggttctggaacggaggagaccgaggatgagaacgaggaggaaactagtgag
attatgacgcaaaatccatcttttgaaaacgctggaaatgtgccctgtaagagccttttg
tgtgatggtggtggcaattcctactcaagatggcttgcttcctccaacagcatccaatat
tcattgcatggtttgtcagttgattctcgaaacgaaccgaaatctccagagctgtccgtt
gacgaatcccaagatatcgacagagatagcagcgactctggaaagaagaggaaaaggagg
gtgctgttttccaaagcgcaaacatatgaactagagcgacgattccgacaacagagatat
ctctctgcgcccgagagggagcaccttgccaacgcactacgactgacacagacccaggtg
aagatctggttccagaatcaccggtataaaatgaagagagcacgcgctgagaagggtatg
gaaatggttcatctcgtgtccccaagacgcgtggccattccggttttgattcgggatgga
aaaccgtgtgacactagcaagactcaggaacttgaggcctcgttcagggctggaatacct
ctctcggcgtatagcgcctattctctccatcacatgcatatgcgctctcactacagcccc
gacgccatgtcacaactgcccagtctgcatcacttggcgcaaatgtaccaatggacttgg
tag
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