Coregonus clupeaformis (lake whitefish): 121552493
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Entry
121552493 CDS
T08357
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121552493
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
121552493
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GFIT
Motif
Pfam:
GDPD
C2_GDE1
CBM_20
TreTu_C
Motif
Other DBs
NCBI-GeneID:
121552493
NCBI-ProteinID:
XP_041721370
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All DBs
Position
36
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AA seq
671 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGDWCHQRAVTLQLVEHDGTLWKRTISVPRGA
VPTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDDGQFGFHNGSECM
DSGWLTCQTEIRLRLHFSKTSPVSITKKKYKKSRFRIKLTLEGVEEEEDDDEEPEQSAAS
RHKMTTTLEISMISGDGYKSRHSQPECGYALEASQWTEYIIHTMDPDNLELTFDFFEEDM
GEHVMPGDAHPGTVGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPI
EGLQCDMSSSFTKYWRKRSVPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVE
FDVHLSKDCVPIVYHDLTCCISTKKKGDKHSLELFEVPVKDLTYDQLQQLKLGHASALKV
NDHKDDDDEEEVDEHQPFPSFSQIFHAVPENVGFNIELKWICQMKDGSWEGNLSSYFNMN
LFLDIILSCALQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISETYPELMDIRC
QTTQIAMSFAQSENILGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNYHDNRTTLRE
QGIDGLIYDRICDDQVDQPDIFKVEAQHTLQETLKSFVCSCYSIPCQAPVCASSTSSKVH
STESDSGLSSS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gccgtggttggtagctgtgaagctttaggagactggtgccatcaaagagctgtgacccta
caactggttgaacacgatgggacattgtggaagaggaccatcagtgtgcccagaggtgct
gtgccaacctatcgctacttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccatcagcaaccacgcctgatgagccccaca
gaatcacaccttgatattgacgatggccaatttggattccacaacggctcagagtgtatg
gactctgggtggctgacatgccagacagagatccgtctacgtctgcacttctctaagacg
tctcccgtatccatcaccaagaagaaatacaagaagtctcgcttcaggatcaagctgacg
cttgagggtgtagaggaggaggaggatgacgatgaagagccagagcagagtgcagcgtcg
cggcacaagatgaccaccacgctggagatcagtatgatcagtggagatgggtacaagtcc
cgccactcccagcctgagtgtggctacgccctggaggcctcacagtggaccgagtacatc
atccacaccatggatcccgacaacctggaactcaccttcgacttctttgaggaggatatg
ggtgagcatgtgatgccaggggatgcccacccggggacggtgggtacggcctgcctcctc
tcctcattcttcgtggagagtggcaaggacacaggtgtggtcactctgcccatcatgaaa
cgcaactccagacagaccctgggcaaagtcagagtggactacctggtgatccgtcctatc
gagggactacagtgtgacatgagctcctccttcaccaagtactggaggaagaggagtgta
cccctggacgtaggccacagaggggccggcagcacacacgcagccaaacatactaaagtc
agggagaacaccattgcttcgttcaaaagtgctgccaaccatggggctgcctatgtggag
tttgacgtccatctctccaaggactgtgtccccattgtgtaccacgatctcacctgttgc
atctccactaagaagaaaggagacaagcactctctggagctgtttgaagttcctgtcaaa
gatctcacatacgaccagctacaacagctcaagctgggtcatgcttcagccttgaaggtg
aacgaccacaaagatgacgacgatgaggaagaggttgacgagcatcaacccttcccttca
ttctcacagatcttccatgcagtgcctgaaaatgtggggttcaacatcgaactgaagtgg
atttgtcagatgaaggatggttcgtgggaaggaaacctgtcttcctacttcaacatgaac
ctgttcctggacatcatactgagctgtgcgctgcagagagccggcaagagacgcatcgtc
ttctcctgcttcgaccctgacgtctgcaccatggttcgtcagaagcagaacaagtaccct
atcctgttcctgacccaaggaatctctgagacctatcctgagctcatggacatccgctgt
cagaccacacagattgccatgagcttcgcacagagcgaaaacatcctgggtatcagtgcc
cacacagaggagctgcttcagaacctggaacacatccgagaggcccagtctaaaggcctg
gtggtgttctgctggggagacctcaacaactaccacgacaacaggaccacactacgggag
cagggcatcgacggactcatctatgacaggatctgtgacgaccaggttgaccagcccgac
atcttcaaagtagaggcgcagcacacgctgcaggagactctcaagagctttgtgtgctcc
tgctactccatcccctgccaggcgcctgtctgcgcctcctccacctcctccaaggtgcac
agtacagagtccgactcaggcctcagctcctcctga
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