Coregonus clupeaformis (lake whitefish): 121552553
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Entry
121552553 CDS
T08357
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121552553
Enzymes [BR:
cclu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
121552553
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121552553
Prokaryotic type
121552553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
121552553
NCBI-ProteinID:
XP_045074873
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MTMKEEAPSVPECYISEHEGFYGTIKNSTRDFIVTEIDIHGQMVTKPSVSDVPQSSNIIE
ACPGAKSERKKNIISPKHQHNLKEEKCTPVVKDVDSEPGPGQNGDITSTPSQDCFDLSLI
LGQSVCEELEQFTALLREASLSPNDGVEKKLANQESSNGSEKKMANQELSLGSFPDKHQR
ANVHRAVRHNFPFLLTVTNQSEIRVKEDPDFKLLSGLVSEEEAEYFFRFIDTKMPNSVYT
FRGDDSKEHRTAVHHFLSRRFGKLVETKSFSDQQQKTTAITVRLRGKGKPRKRMADDSKG
EEVYTAFTLRKENLETLEATSYMAAVLGVLPSGFTYAGIKDKRAVTYQSMVVKKISPQRL
REKASEFEKRGMVLSSVRSVPEPLHLGRLQGNHFDLVVRDLRPHQGHDTLMELDSLVQEA
VENVKVRGFVNYYGPQRFGTGQSVQSDSVGLALLKEEMVAAVHLFFTPEEGDDPQSVAKR
HFLQTDNAKEALSLMPMSKARERLMLRALHRYGTGPEGCTRAWLSLPHGMRVFYPHAYCS
RVWNEAAAHRLTTLGHRARQGDLVWKQRGEEGIEMGEPSLPQIHVVTAAEEEEEVYSLGQ
VVLPMLGSSVKYPENPVGGWYQERLARDGLQSCRFRVTPLKLNLPGCYRPLLAIPRNLTY
RLEQGQRAGERQQDSNGKSPQASGAVPQHPGADTTRPAGLERQKGGESVQGNGEGKSAVQ
YPDTDTPSLTLNFDLDSSCYATVCLREVMKCDP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaggaggaggcaccgagtgtccctgagtgctacatctcagaacatgaaggg
ttctatggaaccatcaagaactccaccagagactttatagtcacagagatagacatccat
ggccagatggtcactaaacccagtgtatctgatgttcctcaatcatccaacattattgag
gcatgcccaggtgccaagtctgaaagaaagaaaaatattattagcccaaaacatcaacac
aacctaaaagaagagaaatgtactccggttgtaaaggatgtggattcagaacctggaccg
ggtcagaatggtgacatcacatccacccccagccaagactgttttgacctgagcttgata
ctgggtcagtctgtctgtgaagagctagagcagttcactgctttattgagagaggcgtca
ttaagtcccaatgatggcgttgagaagaagttggccaaccaagaatcatccaatggcagt
gagaagaagatggccaatcaagagttatccctgggttcattcccagacaaacaccaaaga
gctaacgtccaccgcgctgtccgacacaacttccccttcctgttgacagtaaccaaccaa
tcagagatcagggttaaggaggaccctgactttaagcttctgtcaggtttggtctcagag
gaggaggccgaatactttttcaggttcatcgacaccaagatgcctaactctgtgtacacg
ttcaggggtgacgacagtaaggagcacaggacggcagtgcaccacttcctcagtagacgg
tttggtaaactggtggagaccaagagcttcagtgaccagcagcagaagactacagccatt
acggtgaggttgagaggaaaagggaaacccaggaagagaatggctgatgatagtaaaggg
gaagaggtctatacagcgttcactctgaggaaggagaacctggagactctggaggctacc
agctacatggcagctgtcctgggggtgctgccctctggcttcacctacgctggcatcaag
gacaagagggccgtcacctaccagtccatggtggtcaagaagatctcaccacaacggctg
agagagaaggccagtgagtttgagaagagggggatggtcctctcctccgtccgctccgtc
cctgagcctcttcatctgggtagactccaggggaaccactttgacctggtggtacgggat
ctcagaccacaccagggtcatgacacactgatggagctggactcactggtgcaggaggct
gtggagaacgtcaaggtcagggggtttgtgaactactatggacctcagaggtttgggact
ggacagagtgttcaatctgacagcgtcggactggccctgctcaaagaggaaatggtggca
gctgtccatctgttcttcacaccagaagagggtgatgaccctcagagcgttgccaagaga
cacttcctccagactgataatgctaaggaggccctgtctctgatgcccatgtccaaagcc
agagagaggctgatgctgagggccctacatcgctatgggacgggcccagagggctgtact
cgtgcctggctcagcctgccccatgggatgagggtcttctacccccacgcgtactgtagc
cgggtctggaacgaggcggctgcacacaggctgaccacgctgggccacagggccaggcag
ggagatctggtctggaagcagaggggagaggaggggatagagatgggagaacccagctta
cctcagattcatgttgttacggctgcagaggaggaggaggaagtctactcactaggacag
gtggttcttcccatgcttggcagcagtgtgaagtacccagagaaccctgtagggggatgg
taccaggagagactggcgagggacggactacagagctgtcgtttcagagtcactcctctc
aaactgaacctccctggctgctaccgccccctactggccatcccacgtaacctcacctat
aggctggagcagggccagagagctggggagaggcaacaggacagtaatggaaagtcccca
caggctagtggagcggtaccacagcaccctggcgcagacacaaccaggcctgcaggtctg
gagaggcagaaaggaggggagagcgtgcaggggaatggagaggggaagtcagcggtgcag
taccccgacacagacacacccagcttgacgttgaactttgacctggactcttcctgctac
gccaccgtctgcctcagagaggtcatgaaatgtgacccttag
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