Coregonus clupeaformis (lake whitefish): 121552594
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Entry
121552594 CDS
T08357
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121552594
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121552594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121552594
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121552594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
TMEM138
Motif
Other DBs
NCBI-GeneID:
121552594
NCBI-ProteinID:
XP_041721489
LinkDB
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Position
4:16061722..16076675
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AA seq
457 aa
AA seq
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MNRLLFVSHLLIILAGSAWSSDDETRLVKTLFTGYNKVVRPVAHFRDPVVVTVGLQLIQL
ISVDEVNQIVNSNVRLKQQWKDVNLQWNPEDYGGIKKIRVPSTDIWRPDLVLYNNADGDF
AIVHETKVLLEHTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVNP
DSDRPDLSNFMESGEWVMKDYRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVII
PCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLF
TMVFVIASIIITVIVINTHHRSPSTHTMSPWVRKIFIDTIPNLMFFSTMKRPAKEKQDKR
IYGADFDISDISGKPTPTAVTYQSPMTKNPDVRSAIEGVKYIAETMKSDEESNSAAEEWK
FVAMVLDHILLCVFMAVCIIGTLGVFAGRLIELSMTP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtctactttttgtttctcatctccttatcattctagcaggctctgcctggagc
tctgatgatgaaacccgtctggtgaaaaccctgttcactggctacaacaaggtggtgcgt
cctgtcgctcacttcagggacccagtggtggttacagttggtctgcagctcattcaactc
atcagtgtggatgaggtcaaccagattgtcaacagcaatgttagactgaaacagcaatgg
aaggatgtgaacttgcaatggaatcctgaggattatggtggaatcaaaaagataagagtg
ccctccactgacatttggcgtcctgacctcgttctctataacaatgctgatggtgacttt
gccatcgttcacgagaccaaagtgctgctggagcacactggcatgatcacgtggaacccc
cctgccatattcaagagttactgtgagatcatcgtgctgcacttcccctttgacctgcag
aactgcagcatgaagctgggtacctggacctatgatggcaacttggttgtcgtcaatccc
gacagcgaccgtcctgacctgagtaacttcatggagagtggagagtgggtgatgaaggat
taccgcagctggaaacactgggtgtactatgcctgctgccctgacacgccctacctggac
atcacctaccacttcctgatgctgcggctacctctctacttcatcgtcaacgtcatcatc
ccctgcatgctcttctccttcctcactggcctagtgttctatctgcccactgactctggt
gagaagatgactctgagtatctctgtcctgctgtctctgactgtgttcctgctggtcatc
gttgagctcatcccctccacctccagtgctgtgcctctcatcgggaagtacatgctcttc
acaatggtcttcgtcattgcctccattatcatcactgtcatcgtcatcaacacccaccac
cgctcccccagcactcacaccatgtctccctgggttcgcaagatttttattgacaccatt
cccaacctcatgttcttctcaacaatgaagcgtcctgcaaaggagaaacaggataaaaga
atctatggtgctgactttgacatctcagacatctcaggaaagcccacccctactgcagtc
acctaccagtcccccatgaccaagaacccagatgtacgcagtgctattgagggggttaag
tacattgctgagaccatgaaatctgatgaggagtccaacagcgctgctgaagagtggaag
tttgtggccatggtgctggatcacattctgctgtgtgtgttcatggcagtgtgtatcatt
ggcacactaggagtgttcgcaggccgtctcattgagctcagcatgacgccttag
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