Coregonus clupeaformis (lake whitefish): 121552599
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Entry
121552599 CDS
T08357
Name
(RefSeq) syntaxin-7-like
KO
K08488
syntaxin 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
cclu04140
Autophagy - animal
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121552599
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121552599
04140 Autophagy - animal
121552599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121552599
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121552599
Membrane trafficking [BR:
cclu04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
121552599
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121552599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
Cep57_CLD_2
TOP_N
DUF4191
DASH_Dad4
DUF2730
RTT107_BRCT_6
Motif
Other DBs
NCBI-GeneID:
121552599
NCBI-ProteinID:
XP_041721491
LinkDB
All DBs
Position
Unknown
AA seq
262 aa
AA seq
DB search
MAYQYGKVQDPNVLTQTIISNIQKITQQTSEIQSIVNKLGTQQDTTELRQQLQQKQQNVN
HLAKETDRCVKQFGSLPVTTEQRQRKIQKDRFINDFSNALANFQKTQRQAAQKEKAFVAR
VRAESRVSGGYPDDSFGGNGNSFESGGQAQVQSQSQEVAITEEDLQLIQERETSIRQLES
DITDINEIFKDLGMMVHEQGDMIDSIEANVETADLHVQNATQQLAQAADYQRKSRKKICI
LIAVLVVLAVIVGLIIWASVKG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccagtacggaaaagtgcaggacccaaatgtgcttactcagacaataatctcc
aacatccagaagataacacaacaaacatctgaaatacagagtattgtgaataagttggga
acacaacaagacacaactgagctcagacagcaactgcagcagaaacagcagaatgtcaac
caccttgccaaagaaacagaccgatgtgtgaagcaatttggctctttgcctgtcacaact
gaacagcgccagagaaagatccagaaagaccgatttatcaatgacttctccaatgcactg
gccaatttccaaaagacacagaggcaggctgctcagaaagagaaggcgtttgttgccaga
gtccgtgccgagtccagagtgtcgggtggctatcctgacgacagctttggtggaaatgga
aactcctttgaaagtggggggcaggcccaggtccagtcacagtcccaggaggtggccatc
actgaagaggacctgcagctcatccaggagagagagacttccatcagacagctagagtct
gatattacagatatcaatgaaatatttaaggacttgggaatgatggtccatgagcaaggg
gatatgatcgacagtatagaggccaatgtcgaaactgctgaccttcatgttcagaatgcc
acccagcagttagcacaggctgcagactatcagcgcaaatctaggaagaagatctgcatt
ctcattgccgttctggtggttctcgctgttatcgttggtttaatcatctgggcatcagtc
aaagggtga
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