Coregonus clupeaformis (lake whitefish): 121552616
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Entry
121552616 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 2
KO
K10489
zinc finger and BTB domain-containing protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121552616
04121 Ubiquitin system [BR:
cclu04121
]
121552616
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121552616
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121552616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SPR1
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
121552616
NCBI-ProteinID:
XP_041721515
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All DBs
Position
36:1266624..1294341
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AA seq
528 aa
AA seq
DB search
MELAKHGLMLLQQLNAQREFGFLCDCTVVIGDVFFKAHKAVLAAFSNYFRMLFIHQDSDC
VRLKAADIQPDIFSYLLNLMYTGKLAPQLIDPARLEQGVKFLHAYPLLQEASQTAFSHPE
PSMPLSTSLFGIQISDQQVALSGRLPARRQLSSPFDLDSLPDGKYPSTSAVAAAFANHAS
NLDSSFQEMVEASTSGHPASYEDKHRGDTLTGEAPYPDNSNTILHVKPSIMKRSASFRKH
YSCHLCASRFNQRNLLREHLLQHSQAQLPLVAEPSDADSPVIPGGGATTPDVEEVLLRGG
GEPSTDMTVEMLSDSEQAPLSGSNMDSPRAELSTSGWATGYQSQANTPPPSDIADIDNLE
SADLDHEVKRRKYECSTCGRKFIQKSHWREHMYIHTGKPYKCSACGKSFCRANQAARHVC
LSQGAEAYTMVDRQSMELCAAGDDTSQMEVLYLGSARPYKCNVCETTFSSPNEVIKHLCF
SQGAVAGLQGQAGVELLQGEEFPKDQGSDSSGAGHLITPIKTEQILVE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggagttggccaaacatggtcttatgctcctgcagcagctcaacgctcagagggagttt
ggcttcctgtgcgactgcaccgtcgtgatcggcgatgtcttcttcaaagcccacaaggcc
gtgttggccgccttctccaactacttcagaatgctcttcatacaccaggacagtgattgt
gtccgcctgaaggcagccgacatccagccagacatcttcagctacctcctcaacctgatg
tacacagggaagctggcccctcagctcatcgacccagcccggctggagcagggggtcaag
ttcctccacgcctaccccctcctccaggaggcaagccagacagccttctcccaccccgag
ccaagcatgcccctctctacttccctctttggcattcagatctctgaccagcaggtggcg
ctgtccggcaggctgcctgctcgacgccagctctcctcgccctttgacctggacagcctc
cctgatgggaagtatccgtccacgtctgctgtagcagcggcgttcgccaaccatgcgtcc
aatctggactcttcatttcaggaaatggtggaggcttcaaccagtggccatccggcctcg
tatgaggacaagcatagaggtgacaccctgacaggagaggctccctacccggataactcc
aacaccattctccatgtgaaaccaagcatcatgaagaggagtgcctccttcaggaagcac
tactcctgccacctgtgtgccagccgcttcaaccagaggaacctgttgagggagcatctc
ctgcagcacagccaggcccagctccccctggtggccgaacccagcgatgcagactcccct
gtcatcccaggaggaggagccaccacaccagatgtagaggaggtgctgctaaggggaggt
ggagaaccgtccactgacatgacagttgagatgctgagtgacagcgagcaagcacctctc
tctggttccaacatggactctcccagagctgagttgtcgacgtcggggtgggcgacgggg
tatcagtcccaggccaacaccccacccccatcggacattgcggatatcgacaaccttgag
agtgctgacctggaccacgaggtgaagcgcagaaagtacgagtgctccacctgcggtcgc
aagttcatccagaagagccactggcgagagcacatgtacatacacacgggtaagccctac
aagtgcagcgcctgtggcaagagcttctgtcgtgccaaccaggcagcgcgccacgtgtgt
ctgagccagggcgccgaagcctacaccatggtggaccggcagagtatggagctgtgtgct
gcaggggacgacaccagccagatggaggtgctgtacttaggctcggccaggccctacaag
tgtaatgtctgtgagaccaccttctccagccccaacgaggtcatcaagcacctgtgcttc
agccaaggggcggtagcaggcctgcaggggcaggcaggggtggagctgctgcagggggag
gagtttcccaaagaccagggctctgattcgtccggcgcaggccacctcattacgcccata
aaaactgagcagatcttggtggagtag
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