Coregonus clupeaformis (lake whitefish): 121552619
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Entry
121552619 CDS
T08357
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121552619 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121552619 (gtf2e1)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
121552619 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
121552619 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
121552619
NCBI-ProteinID:
XP_041721521
LinkDB
All DBs
Position
4:complement(15942632..15983483)
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AA seq
454 aa
AA seq
DB search
MSEPELLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVHLSNDLLEPEPAEIPALKQSRDRAAAAAGAAAGGPHREAWSTK
SSSYADLYTQNVEISMGEQGEQQRRQASEGKAPRERPVWLTESTVHGGTYSEPDPLKNSG
DDAAGAQMGVAGLGGGQSDENEEVMRALLIHEKRSGAGPAGGGAVAAARALISSSAAKGS
DSESDTSESDEDSPMAPPPVAAAQRRPTGMEMEEEDDDEEFEEVGEDEPMVMVGGRSFSY
REVSQRPELVEKMSSQEKEAYIEMGQNIFQEMYF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagaattattaacagaggtccctgcttcgctgaagcgcctggccaagcag
gttgtgcggggcttctacggggtggagcatgccctggctctggacgttctcatccgcaac
ccctgcgtccgtgaggaggacatgctggagttgctcaagtttgaccgaaagcagctgcgc
tcggtgctcaacacgctcaagggcgataagttcgtcaagtgccgcatgcgggtggagacg
gctcccgatggcaagaccacgcgccacaactactacttcatcaactaccgcctgctggtc
aacgtggtcaagtacaagctggatcacatgcggcggcgcatcgagacagacgaaagggac
tcaaccaaccgggcgtcgttccgctgcccctgctgcttcagcaccttcactgacctggag
gccaatcagctgtttgaccccatgaccgggacatttcgttgtacgttctgtcagacggag
gtagaggaggatgagtctgcggtgcccaagaaggacgccaggaccctggtggcccgtttc
aacgaacagatcgagcccatatatgtgctactgcgcgagacagaggacgtccacctatca
aacgacctgctggaaccagagcccgccgagatccccgccctcaaacagagtcgggaccgt
gcagcagcggcggcgggtgcagcagctggcggtccccaccgggaggcctggtccaccaag
agctcgtcgtacgccgacctgtacacccagaacgtggagatcagcatgggggagcagggg
gagcagcagcgcaggcaggccagcgagggcaaggcacctagggagagacccgtgtggctg
acagagagcactgtgcatggaggaacatacagcgagccagacccactcaagaactccgga
gacgacgcggcaggagcccagatgggcgtggccgggctcggcggcggccaatcagacgag
aacgaagaagtgatgcgcgccctgctcatccacgagaagaggagcggcgccggcccggca
ggaggcggagccgtagcggcagccagggcgctcatctcctcatcagcagccaagggcagc
gactcggagagcgacaccagcgaatcagacgaggactctcccatggctccgccccctgtg
gctgcagcccagcggcggccgacgggtatggagatggaggaggaggatgatgatgaagag
tttgaggaggtgggggaggatgagcccatggtaatggtggggggaaggtcattctcctat
cgggaggtgagccagagaccagagctagtggagaagatgagctctcaagagaaagaggcc
tacatcgagatgggacagaatatcttccaggaaatgtacttctaa
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