Coregonus clupeaformis (lake whitefish): 121552620
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Entry
121552620 CDS
T08357
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121552620 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121552620 (capn3b)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
121552620 (capn3b)
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C2: calpain family
121552620 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
121552620
NCBI-ProteinID:
XP_041721517
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Position
36:complement(33533154..33561086)
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AA seq
770 aa
AA seq
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MALVEETSVKVALETEASPEVPQGKTDYPFTASNSIYTAILSRNEAVKDAKRLKNFLELR
DKYVQKKVLFEDPLFPANDSSLWYSSKFPIDFEWKRPTEICDNPQFIIDGASRTDICQGE
LGDCWLLAAIACLTLNDKLLYRVIPPDQSFTENYAGIFHFQFWRYGEWVDVVVDDRIPTS
NNHLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFFEISEAP
KELYRIMKKALERGSLMGCSIDDLLPSHCETETANGLVRGHAYSITALEECDKLKVTKDT
KIRLVQMRNPWGMVLWKGPWNAKSKEWSTISSSDKARLKKKTVETSETWISFEDFKKNFT
KLEICNLTPDALLDDKSHRWTVAVNEGRWVRGSSAGGCRNFPDTFWTNPQYRMRLYEEDD
DPDDPEHVACTVMVALMQKGRRKDRNKGAKLYTIGFSIYEVPKEMVGSQQHLQKDFFLYN
ASKAKCKSYINLREVSERFCLPPGEYVIIPSTFEPHEEGEFILRVFSEKNSTSEETENTI
RSDQIEQGKNRTKKGKPIVFVSDRAKANKEIEQDDIEVEKEQKEKVKPKPQQPDEESGEH
KMFRAIYQQIAGEDMQICANELKVVMKRVLEKHNDMKTDGLSLESCRSMIALMDTDGTGK
LNLQEFKHLWSKIKAWQLIFKKYDKDKSSTISSFEMRNAVNDAGFRLNNQLYDIITMRYA
DEHLNIDFDSFICCFVRLEGMFRTFHAFDRDGDGIIKLNVLEWLQLTMYA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgttgaggaaacttcagtgaaggtggcgttggaaactgaagcatcacctgag
gtgcctcagggtaagactgactaccccttcacggccagcaacagtatctacaccgccatt
ttgagcagaaacgaggccgtcaaagatgccaaacgcctgaagaacttcttggagttgcga
gacaaatacgtacaaaagaaggtcctgtttgaagaccctctgttcccagccaatgattct
tctctttggtacagtagcaaatttccaattgactttgagtggaagcgcccaacggaaatc
tgtgacaacccccagttcatcatagacggagccagtaggacagacatctgtcaaggagag
ctgggtgactgctggctgcttgctgctattgcctgtctgacactgaatgacaagctgctg
tacagagttatcccaccagaccagagtttcacagagaactacgctggtatcttccatttc
cagttctggcgttatggcgaatgggtggacgttgtggtggatgaccgtatccccacctcc
aataaccacctggtgtttaccaagtctttcaggaagaacgagttctggagcgctctgctg
gagaaggcttatgccaagttgcacggttcctacgaggccctgaaaggtggcaacaccctg
gaggccatggaggacttcactgggggtgtgacagagttctttgagatctcagaggctcca
aaagaactctacaggatcatgaagaaagccctggagagaggctctctgatgggctgttcc
atagacgacctgctgccaagtcactgtgagactgaaactgcaaatggactggtcaggggc
cacgcctactctatcactgcgctagaggagtgtgacaagcttaaggttaccaaggatacc
aagattcgcctagttcaaatgcggaacccctgggggatggtgctatggaaagggccatgg
aatgcaaagtccaaagaatggtccaccatctccagctcagacaaggccaggctgaagaag
aagacggttgagacgagcgagacttggatatcctttgaggacttcaaaaagaacttcacc
aagctggagatctgtaacctgacccctgacgcactgctagacgacaagtcccataggtgg
actgtggcggtcaacgagggccgctgggtacgaggcagctccgccggaggctgcaggaac
ttcccagacacgttctggaccaacccgcagtaccgcatgcgtctgtacgaggaggacgac
gaccccgacgaccccgagcatgtggcatgcaccgtcatggtggccctgatgcagaagggc
cggaggaaagaccgcaacaagggtgccaagctctacaccatcgggttctccatctacgag
gtgcccaaagagatggttgggagccagcagcacctgcagaaagacttcttcctttacaat
gcctccaaggccaaatgcaagtcctacatcaacctgcgtgaggtgagcgagcgattctgc
ctgccccctggggagtacgtgatcatcccttcgacctttgaaccccacgaggagggagag
ttcatcctcagagtcttctccgagaagaacagcacctcagaggaaaccgaaaacacaatt
aggtcagaccaaatagagcaaggcaaaaacaggacaaagaaaggaaagcccatcgtgttt
gtatcagacagagcgaaggccaacaaggagattgagcaagatgacatcgaggttgagaag
gagcagaaagagaaagtcaagccaaaaccacagcaaccggatgaggagagcggagaacac
aaaatgttcagggccatttaccagcagattgctggggaggacatgcagatctgtgccaac
gagctcaaggtggtcatgaaaagggtactggaaaaacataatgacatgaagacggacggc
ttgagcttagagagttgccggagcatgatcgctttgatggacacggacggcacaggaaaa
ctgaacctgcaggagttcaaacacctgtggagtaagatcaaagcgtggcagctgatcttc
aagaagtatgacaaggacaaatccagcaccatcagcagctttgagatgaggaacgcagtc
aatgacgcagggttccgtctaaacaaccagctgtatgacatcatcaccatgcgctacgct
gacgagcacctcaacatcgactttgacagcttcatctgctgcttcgtcaggctagagggc
atgttcaggacgttccatgcctttgacagagacggagacggtataatcaagctcaacgtc
ctcgagtggctccagttgaccatgtatgcttag
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