Coregonus clupeaformis (lake whitefish): 121552683
Help
Entry
121552683 CDS
T08357
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00562
Inositol phosphate metabolism
cclu01100
Metabolic pathways
cclu04020
Calcium signaling pathway
cclu04070
Phosphatidylinositol signaling system
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04270
Vascular smooth muscle contraction
cclu04310
Wnt signaling pathway
cclu04371
Apelin signaling pathway
cclu04540
Gap junction
cclu04621
NOD-like receptor signaling pathway
cclu04912
GnRH signaling pathway
cclu04916
Melanogenesis
Module
cclu_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121552683
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121552683
04371 Apelin signaling pathway
121552683
04020 Calcium signaling pathway
121552683
04070 Phosphatidylinositol signaling system
121552683
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
121552683
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121552683
09152 Endocrine system
04912 GnRH signaling pathway
121552683
04916 Melanogenesis
121552683
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121552683
04270 Vascular smooth muscle contraction
121552683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121552683
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
121552683
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121552683
Endocytosis
Macropinocytosis
Phospholipase C
121552683
BRITE hierarchy
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLC-beta_C
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
121552683
NCBI-ProteinID:
XP_041721624
LinkDB
All DBs
Position
36:23438888..23626575
Genome browser
AA seq
1241 aa
AA seq
DB search
MAGAQPGVHALQLKPVSVSESLRKGNKFMKWDDDSTTVTPVTLRVDPQGYFLYWTDQNKD
TDLLDIAYIKDARNGKCTKTPKDLKLRELLDVSTLVGKMENRMLTVVSGPDMVNITYLNF
MAFQEEIAKEWAEELFGLASNLLAQNMSREACLEKAYTRLKLQLNSEGCIPVKNIFRMFS
ADRKRVETALENCNLPSGRSDSIPQEDFTPEIYTVFLTNICPRPELDNIFSDVGAKSKPY
LTVEQLTEFINVRQRDPRLNEILYPPLKPEQVQSLVDKYEPKELLVQKGQISVEGFAKYL
SSEENSIIPPEKLDQSEDMTLPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRC
IELDCWKGRTTEEEPVITHGFTMTTEISFKEVIEAIADCAFKTSPFPVILSFENHVDSPK
QQAKMAEYCRSIFGDMLLTDPLEKYPLEPGVPLPSPMDLMGKILVKNKKKHIKTSSTKKK
LSEQASNTYSDSSSVHEPSSPSTGSTNQEMTESSQPLEVAELSLRPQGRKSIGEVEAESD
DDDDDDDDCKKGSMDEGTAGSEAFATEEMSNLVSYVQPVKFNSFEASKKINRSYQMSSFV
ETKALEQLTKSPVEFVEYNKLQLSRIYPKGTRVDSSNYNPQLFWNAGCQLVALNFQTIDL
SMMLNLGMYEYNGKCGYRLKPEFMRRPDKHFDPFAESTVDGIVANTLSVKIISGQFLTDK
KVGTYVEIDMFGLPVDTRRKGFKTKTSQGNAVNPVWEEEAFTLKKVVLPTLASMRISVFE
DGGKFIGHRIIPVNAIRPGYHYIGLRNEKNQALTLPALFVYVEVKDYVPDTFADVIEALS
NPIRYVNLMEQRANQLAALTLEEGAEEEDSKEVDAGGDDPMEPDPRVTLPAENGVNHAPI
ISPKPPSLVSHQPRPTGSVKPAVKTEDVIQSVLTEMEAQTLEELKQQKGVVREQRRQYKE
MKELVRKHHRKTSELIKEHTARAAELQNQHQRRRSALQKSHKRDGKKSRSEQYLSSLEQE
LCVLDQESSQRLSELKEKQQQQLLTLRQEQYYSEKYQKKEHIKMLVEKLTTIAEECQSAQ
LKKIRDICDKEKKDLKKKMDKKRQEKINEAKANNKNVTEEEKLEINRSFVNEVVQYIKRL
EDAQSKRMERLLEKQKDIRQQIVDEKPKLQTELDQEYQDKFRRLPLEILEFVQDSSKAKL
SDDNTHGNLSVSSTTERLNHKASQSEDDTEDSSERVFDTPL
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggccggggctcagccaggagttcacgcgctgcagctcaagcccgtgtccgtgagcgag
agcctgagaaagggcaacaaatttatgaaatgggatgatgactccactacggtgacccct
gtgaccttacgagtcgacccccagggctacttcctgtactggactgaccagaacaaggac
actgatctcctggacatcgcctatatcaaggacgccaggaacggaaaatgcaccaaaacg
ccaaaggacctgaagctacgggagctgctggacgtgagcaccctggtggggaagatggag
aacaggatgctgacggtggtgagcggaccagacatggtcaacatcacgtacctcaacttc
atggccttccaggaggagatcgccaaggagtgggctgaagagttgtttggcttggcgtct
aacctactggcccagaacatgtccagagaagcatgccttgagaaagcatacacacgactg
aagctacagctcaactcagagggatgcatccctgtcaagaatatctttaggatgttctca
gcagacaggaaacgagtggagacagctctggagaactgcaacctcccttctggacggagt
gactctatccctcaagaggacttcactccagagatctacacagtgttccttaccaacata
tgtccacgaccagaactagacaacatcttctctgacgttggagctaaaagcaaaccctac
ctgacagtggagcagctgactgagtttataaatgtccgacagagagaccctcgtctcaac
gagatcctctaccctcctctcaaacctgaacaggttcagagcctggtggacaagtacgaa
cccaaagaactgctggtgcagaaaggtcagatctcggtggagggcttcgccaagtatctg
agtagtgaagagaacagcatcatccctccagagaagctggaccagagtgaagacatgacc
ctaccactgtctcattacttcatcaactcctcccacaatacatacctcacagcgggccag
ctggcaggtaactcgtcggtggagatgtaccgccaggtcctcctttcagggtgtcgctgt
atcgagttggactgctggaagggacgcaccaccgaagaagaacctgtcatcacacacgga
ttcaccatgacaaccgaaatctccttcaaggaagtgattgaggccatagcagactgtgcc
ttcaagacctcccctttcccggtcatcctctcctttgagaaccacgtggactcgcctaag
cagcaggccaagatggcggagtactgcagatcaatatttggagacatgttactgaccgac
cctctggagaagtaccctttggaaccaggagtacccctgcccagtcctatggatctgatg
ggaaagattctggtgaagaacaagaagaaacacatcaagacatcgagcaccaagaagaaa
ctgtcagaacaggcctccaacacatacagcgactcatccagtgtgcatgagccctcttct
cccagcacagggtcgaccaaccaggagatgaccgagtcctcccagcctctagaggtcgct
gagctcagcctccgaccacagggcaggaagtccattggtgaagttgaggcagagagcgac
gatgatgatgatgatgatgatgactgtaaaaaggggtccatggatgagggtacagcgggc
agcgaggcatttgccacagaggagatgtccaacctggtcagttatgtccagccagtcaaa
ttcaactccttcgaggcctccaaaaagatcaatcggagctatcagatgtcatcgtttgtg
gagaccaaagccttggagcagctcaccaagtcacctgtggagtttgtcgagtataacaag
ctgcagctgagtcgtatctaccctaaaggcaccagagtagactcctccaactacaaccct
cagctcttctggaatgctggctgtcaactggtggccctcaacttccagaccatagacctg
tccatgatgttgaacctgggcatgtatgagtacaatgggaagtgtggctacaggctgaaa
ccagagttcatgagacgaccggacaaacactttgatccctttgctgagagcactgtggat
ggcatcgtagccaacacgttgtctgtgaagatcatctcaggccagttcctgactgataag
aaggtggggacgtatgtggagatagatatgtttggtctgccggtggacaccagaaggaag
ggttttaagaccaagacgtctcagggcaacgctgtcaaccctgtctgggaggaggaggcc
ttcactctcaagaaggtggttcttcccactctggcctcgatgaggatttctgtgtttgag
gatggagggaagttcattggccatcgcatcattcctgtgaatgccatccgcccaggttac
cactacattggtctgaggaatgagaagaaccaggctctgacactccctgctctgtttgtc
tatgtagaggtcaaggactatgtccctgatacattcgcagacgtcatcgaggcgttgtcc
aatcccatccgttacgtcaacctgatggagcagagagccaatcaactggcagctctcact
ttggaggagggagcagaggaggaggacagcaaagaggtggatgcgggtggtgatgacccc
atggagcctgacccccgggtgaccctgcccgcagagaacggggtcaaccacgcccccatc
atctcccccaaaccccccagcctggttagccaccagccacggcccacaggttcagtgaaa
ccagcagtcaagactgaggatgtcatccagagtgttcttacagagatggaggcccagaca
ctggaggagttgaagcagcagaagggcgttgtgagggagcagaggaggcagtataaggag
atgaaggagttggtaaggaaacaccaccgtaagaccagcgagctgatcaaggagcacacg
gccagggctgcagagctgcagaaccagcaccagcgcaggcgctccgcgctgcagaagagc
cacaaacgagacggtaagaaaagcaggtcggagcagtatctgtcgtccctagagcaggag
ctgtgtgtgttggaccaggagtccagtcagagactgtctgagctgaaggagaagcagcaa
caacagctactcacactgagacaggagcagtattacagcgagaagtaccagaaaaaagaa
cacatcaaaatgcttgtggagaagttgacaaccatagcagaggaatgtcagagtgcccag
ttgaagaagatcagagacatctgtgacaaggaaaagaaagatcttaagaagaagatggac
aagaaaagacaggagaagattaatgaagcaaaggccaacaacaagaacgtgacagaggaa
gagaagctggaaatcaacaggtcgtttgtcaatgaggtggtgcagtatatcaaacggttg
gaggatgctcagagcaagagaatggagagactactggagaagcagaaggacatcagacag
cagattgtggatgagaaacctaagctgcagaccgagctggaccaggagtaccaggacaag
ttcagacggttgcccctagagatcctggagttcgtccaggacagcagcaaggccaagctt
agcgacgacaatacccatggcaacctgtctgtctcctcgacgaccgagaggctcaaccac
aaagcgtcacagtcagaggacgatacagaagactcgtcggaaagagtgtttgacacgccc
ctttag
DBGET
integrated database retrieval system
