KEGG   Coregonus clupeaformis (lake whitefish): 121552719
Entry
121552719         CDS       T08357                                 
Name
(RefSeq) protein PALS1-like
  KO
K06091  MAGUK p55 subfamily member 5
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519  Cadherin signaling
cclu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    121552719
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121552719
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121552719
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 PDZ domain-containing proteins
  MAGUK family proteins
   121552719
SSDB
Motif
Pfam: Guanylate_kin L27_N PDZ PDZ_6 L27 SH3_2 PDZ_2 SH3_1 DUF8010 SH3_9 PDZ_Tricorn MMR_HSR1
Other DBs
NCBI-GeneID: 121552719
NCBI-ProteinID: XP_041721666
LinkDB
Position
36
AA seq 684 aa
MITSHMNGGPGYVTEDPMGPVSGTEGLGSGAKLQQRERAVDCPPGDKAVGTRSNIGQGTR
CSAQMEKIQLYQEELRRKREEEANKGKHEIDLNASLRLKKLAQNPAKTGIDNPTFEAPEA
SKEAKDGSPLLGGDTAVELEELLEALRRVQSCLVDAQSQADVALVLGLLRKEDFQSAFAI
HSAVSQQMQPRGSPPLPLTAQARSLYQEVQCILQSSHQEEGVELRNLLTTPHFQALMQAH
DSVAEQELEPDPEERMIQYLGETVKLVRLEKAGDMPLGATVRNEMDSVVVSRVVKGGTAE
RSGLLAEGDEILEINGVPVRGKNVNEVHDLLMEMHGTLTFLLIPSSQNKTPSHRQTVMHV
RAYFNYDPSDDPYVPCRELGLSFQKGDILHIISQDDPSWWQAYRDGDEDNQPLAGLVPGK
SFQQQREAMKKTIVDRNPDSPGKLWCAKKNKKQRKKTMHNPNRNVDYYADEILTYEEMAL
YHQPANRKRPIALIGPPNSGQNELRQRLLSIEPDRFAGAVPHTTRNPRIHEKNGREYHFV
NQLAFEADVAAGKFIESGEYERNLYGTSSDSVRQVINSGRICLLCLHTKSLRVLRSSNLK
PYVIFIAPPSQERLRILLAKDGKNPKPEELKELIEKAREMEQAYGHLFDAAIVNGEPDTA
FHELLRLIDKLDTEPQWVPSSWLC
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgatcacttcccacatgaacggaggacccggatatgtaacagaggacccaatggggcct
gtgagtggcacggagggtcttgggagtggagccaagctgcagcagagggagagggcagtg
gactgcccccctggggacaaggcggtggggaccaggagcaacattgggcagggtacccgc
tgcagcgcccagatggagaagatccagttgtaccaggaagagctgaggaggaagagagag
gaggaggccaacaaagggaagcatgagatcgatctcaatgcctcactcaggctcaagaag
ctggcccagaacccagccaagacgggtatcgacaaccccacgttcgaagcgcctgaggcg
agcaaggaggccaaggatgggagccccctgcttggtggggacacggctgtggagctggag
gagctgctggaggccctgcggcgggtgcagagctgcctggtggacgcccagtcgcaggcc
gacgtggccctggtgctgggcctgctgcgcaaggaggacttccagagtgccttcgccatc
cacagcgccgtgtcccagcagatgcagccgcgcggcagcccgcccttgcccctcaccgcc
caggcccgcagcctttatcaggaggtgcaatgcatcctacagtccagtcaccaggaggag
ggtgtagagctcaggaacctcctcaccaccccccacttccaggctctgatgcaggcccat
gacagtgtggcagagcaggagttggagccggacccagaagagagaatgattcagtacctg
ggagagaccgtcaaactggtgcggctggagaaggccggcgacatgcctctgggcgccacg
gttcgtaacgagatggacagcgtggtggtgagtcgcgtggtgaagggcgggacagccgaa
cggagcggtctcctggccgagggagacgagatcctggagatcaacggcgtgcccgtccgc
gggaagaacgtcaacgaggtccacgaccttctgatggagatgcatggcactctgaccttc
ctccttatccccagctcacagaacaaaacaccctcacacaggcagactgtgatgcacgtg
agggcctattttaactacgacccgtctgatgacccgtacgtgccatgcagggagctgggc
ctgtccttccagaagggagacatcctccacatcatcagccaggatgaccccagctggtgg
caggcctacagggacggggatgaggacaaccagcccctagccgggctagtaccaggaaag
agcttccagcagcagagagaagctatgaagaaaaccattgtggacaggaatcctgacagc
ccagggaagctttggtgtgcaaagaagaacaagaagcagaggaagaaaacaatgcacaac
cccaacaggaacgttgactactacgctgatgaaatcctgacctatgaggagatggcgctt
taccaccagccagccaatcgcaagcgacctatcgccctgattggtccgcccaacagcggg
cagaatgagctgcggcaaaggctgctgtccatcgagccggacaggttcgccggagctgtg
ccacatacaacgagaaacccacgcatacatgagaagaacgggagggagtaccactttgtg
aaccagctggcgtttgaggctgatgtggcagcggggaagttcatagagtctggggagtac
gaaaggaacctgtacggcaccagcagtgactcggttcgacaggtcatcaactcaggcagg
atctgtctgctgtgcctgcacactaagtcactgcgggtactgcggtcctccaacctcaag
ccctatgtgatcttcatcgctcctccctctcaggagcgattgcgcatcctgctggccaag
gatggcaaaaacccaaagccagaggagctgaaggagttgatcgagaaggcccgggagatg
gagcaggcctacggccacctgtttgacgcggccattgttaatggcgagccagacacggcc
ttccacgagctcctgcggctcatcgacaaactggacacagagccccagtgggtgccctcc
tcctggctgtgctag

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