Coregonus clupeaformis (lake whitefish): 121552719
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Entry
121552719 CDS
T08357
Name
(RefSeq) protein PALS1-like
KO
K06091
MAGUK p55 subfamily member 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519
Cadherin signaling
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121552719
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121552719
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121552719
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
PDZ domain-containing proteins
MAGUK family proteins
121552719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
PDZ_6
L27
SH3_2
PDZ_2
SH3_1
DUF8010
SH3_9
PDZ_Tricorn
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121552719
NCBI-ProteinID:
XP_041721666
LinkDB
All DBs
Position
36
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AA seq
684 aa
AA seq
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MITSHMNGGPGYVTEDPMGPVSGTEGLGSGAKLQQRERAVDCPPGDKAVGTRSNIGQGTR
CSAQMEKIQLYQEELRRKREEEANKGKHEIDLNASLRLKKLAQNPAKTGIDNPTFEAPEA
SKEAKDGSPLLGGDTAVELEELLEALRRVQSCLVDAQSQADVALVLGLLRKEDFQSAFAI
HSAVSQQMQPRGSPPLPLTAQARSLYQEVQCILQSSHQEEGVELRNLLTTPHFQALMQAH
DSVAEQELEPDPEERMIQYLGETVKLVRLEKAGDMPLGATVRNEMDSVVVSRVVKGGTAE
RSGLLAEGDEILEINGVPVRGKNVNEVHDLLMEMHGTLTFLLIPSSQNKTPSHRQTVMHV
RAYFNYDPSDDPYVPCRELGLSFQKGDILHIISQDDPSWWQAYRDGDEDNQPLAGLVPGK
SFQQQREAMKKTIVDRNPDSPGKLWCAKKNKKQRKKTMHNPNRNVDYYADEILTYEEMAL
YHQPANRKRPIALIGPPNSGQNELRQRLLSIEPDRFAGAVPHTTRNPRIHEKNGREYHFV
NQLAFEADVAAGKFIESGEYERNLYGTSSDSVRQVINSGRICLLCLHTKSLRVLRSSNLK
PYVIFIAPPSQERLRILLAKDGKNPKPEELKELIEKAREMEQAYGHLFDAAIVNGEPDTA
FHELLRLIDKLDTEPQWVPSSWLC
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcccacatgaacggaggacccggatatgtaacagaggacccaatggggcct
gtgagtggcacggagggtcttgggagtggagccaagctgcagcagagggagagggcagtg
gactgcccccctggggacaaggcggtggggaccaggagcaacattgggcagggtacccgc
tgcagcgcccagatggagaagatccagttgtaccaggaagagctgaggaggaagagagag
gaggaggccaacaaagggaagcatgagatcgatctcaatgcctcactcaggctcaagaag
ctggcccagaacccagccaagacgggtatcgacaaccccacgttcgaagcgcctgaggcg
agcaaggaggccaaggatgggagccccctgcttggtggggacacggctgtggagctggag
gagctgctggaggccctgcggcgggtgcagagctgcctggtggacgcccagtcgcaggcc
gacgtggccctggtgctgggcctgctgcgcaaggaggacttccagagtgccttcgccatc
cacagcgccgtgtcccagcagatgcagccgcgcggcagcccgcccttgcccctcaccgcc
caggcccgcagcctttatcaggaggtgcaatgcatcctacagtccagtcaccaggaggag
ggtgtagagctcaggaacctcctcaccaccccccacttccaggctctgatgcaggcccat
gacagtgtggcagagcaggagttggagccggacccagaagagagaatgattcagtacctg
ggagagaccgtcaaactggtgcggctggagaaggccggcgacatgcctctgggcgccacg
gttcgtaacgagatggacagcgtggtggtgagtcgcgtggtgaagggcgggacagccgaa
cggagcggtctcctggccgagggagacgagatcctggagatcaacggcgtgcccgtccgc
gggaagaacgtcaacgaggtccacgaccttctgatggagatgcatggcactctgaccttc
ctccttatccccagctcacagaacaaaacaccctcacacaggcagactgtgatgcacgtg
agggcctattttaactacgacccgtctgatgacccgtacgtgccatgcagggagctgggc
ctgtccttccagaagggagacatcctccacatcatcagccaggatgaccccagctggtgg
caggcctacagggacggggatgaggacaaccagcccctagccgggctagtaccaggaaag
agcttccagcagcagagagaagctatgaagaaaaccattgtggacaggaatcctgacagc
ccagggaagctttggtgtgcaaagaagaacaagaagcagaggaagaaaacaatgcacaac
cccaacaggaacgttgactactacgctgatgaaatcctgacctatgaggagatggcgctt
taccaccagccagccaatcgcaagcgacctatcgccctgattggtccgcccaacagcggg
cagaatgagctgcggcaaaggctgctgtccatcgagccggacaggttcgccggagctgtg
ccacatacaacgagaaacccacgcatacatgagaagaacgggagggagtaccactttgtg
aaccagctggcgtttgaggctgatgtggcagcggggaagttcatagagtctggggagtac
gaaaggaacctgtacggcaccagcagtgactcggttcgacaggtcatcaactcaggcagg
atctgtctgctgtgcctgcacactaagtcactgcgggtactgcggtcctccaacctcaag
ccctatgtgatcttcatcgctcctccctctcaggagcgattgcgcatcctgctggccaag
gatggcaaaaacccaaagccagaggagctgaaggagttgatcgagaaggcccgggagatg
gagcaggcctacggccacctgtttgacgcggccattgttaatggcgagccagacacggcc
ttccacgagctcctgcggctcatcgacaaactggacacagagccccagtgggtgccctcc
tcctggctgtgctag
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