Coregonus clupeaformis (lake whitefish): 121552744
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Entry
121552744 CDS
T08357
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121552744
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
121552744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
Motif
Other DBs
NCBI-GeneID:
121552744
NCBI-ProteinID:
XP_041721704
LinkDB
All DBs
Position
36:complement(34645627..34665533)
Genome browser
AA seq
486 aa
AA seq
DB search
MDDLESELRVPGELGENESSDDESINRKRIKKPNLPLAPPIFKEKPCETGFHKTTRNCLQ
HIREALLHHRWQKAAEYMSSYSQTLEDTTANMPQLYAEIIWRIGTEILHHHPDSKLEDYN
SFYERVKHSGVKHYLKVCLEHSFHLLVNGQFEDAKRQLSIAESWRYGKQSADQSQRIKLI
QAYSGFLDYIIWCEKKATVSSTDEYDAGVNQEMHSYFRQSSVNLKEIMKLPGVWDPFVLS
YIDMLEFYNDHEGAVKVLNDYAYDNNLPPNPNAHVYLYRYMKKHDHPSKKLLKVLKILHT
LVPSHELMLEYCSLLLQSDKEGDLQKALGVVLDLLDYASWRSNLDVWNHLMTIIKRLRLR
KQWLKLVEEEMANRKDWWLAMHFTTFQARRDLAVNRELLEVKHFVVGAFCPRYASMYCGV
GKETRKGVTSEAQKTKRSKKAEKDKESKTAKKAQKRTRKAKSRLTLRKLLERRRAHRQEQ
KCFKDA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcttgagtcagaactgagggtgccaggtgaactgggcgaaaatgagtcttca
gatgatgaatcaatcaacagaaaacgaatcaagaagccaaaccttcccctggcgcctcct
atatttaaagagaaaccctgtgagactggttttcacaagaccacaaggaactgcctccag
cacatcagggaggccctgctgcaccatagatggcagaaagctgccgagtacatgtccagt
tactcacaaacactggaggacacaactgcaaacatgccacaactctacgctgagatcatt
tggaggataggcacagagatactacaccaccatcccgactcaaagctggaagactacaac
agtttctatgagcgagtgaaacactcaggagtaaaacattacctgaaagtctgtctggag
cactcgttccacctcctggtgaatgggcagtttgaggacgccaagcgtcagctgtccatt
gctgagagctggcggtacggcaagcagtcagccgatcagtcccagcggattaagttgatc
caggcctacagtggcttcctggattacatcatctggtgtgaaaaaaaagccactgtctcc
agcacagatgagtatgatgcaggtgtcaatcaagagatgcacagctacttccgccaatcc
tctgtgaacctgaaggagatcatgaagcttcctggtgtctgggatccttttgttctgagt
tacattgatatgctggaattctacaacgatcacgagggagctgtgaaagttctaaatgac
tacgcctatgacaacaatttgccccccaaccccaatgcccatgtctacctctaccggtac
atgaagaaacacgaccacccatcaaagaaactgctcaaagtgctgaagatcctgcataca
ttggtcccaagtcatgagttaatgctggaatactgttctcttctgctacaatccgacaaa
gagggggatcttcagaaggctctaggtgtggttctggatctcctggactacgccagttgg
aggagcaacttggatgtctggaaccatttgatgaccatcatcaagaggctgaggctcaga
aaacaatggctgaagcttgttgaagaggagatggcgaacagaaaggactggtggctagca
atgcacttcacaacattccaggccaggagagacttggcagtgaatagagagctactggaa
gtgaagcactttgtggttggagccttttgtcctcgctatgcttccatgtactgtggtgtt
ggtaaggaaacccgaaaaggagttacttctgaggcgcagaagactaaaaggtccaagaag
gccgagaaggataaggaatccaagaccgctaagaaggcccagaagagaacacggaaagca
aagtccagactgactttgagaaagctcctggaacggcgccgggcacatcggcaagaacag
aaatgttttaaagatgcgtga
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