Coregonus clupeaformis (lake whitefish): 121552779
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Entry
121552779 CDS
T08357
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 3 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121552779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121552779
03036 Chromosome and associated proteins [BR:
cclu03036
]
121552779
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121552779
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121552779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
Chromo_MORC2_6th
MSL3_chromo-like
DUF4882
Motif
Other DBs
NCBI-GeneID:
121552779
NCBI-ProteinID:
XP_041721744
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All DBs
Position
36:complement(29142025..29204708)
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AA seq
801 aa
AA seq
DB search
MDESTDTTNAVAPDFDVYGAMDWNDGVGTLPGSELKFKVNEFGVLEVLSEEGDDERVKKA
QATTTWIVPTAQEALSDSLSVAVKEERQEGQWVQRGRVCVRCQRTGSPVDFLSDCLHCSE
RCLQQDQQDELKLKKEVSKSNGEVVGVSRKRPLQQDKKSLADKMDTTEVLPEDHDEDYEE
KDSRKTTRGAPRGRRKRRGDAALLRHTVPYGGKKKSWCWASYLEQDKAIAAPTKLFKEHQ
AFPLSKNGFRLGMRLEGVDPEHPSMYCVLTVAEVSGHRIRLHFDKNSDCYDFWVNSNSAD
IHPVGWCEKTGHKLHPPKGMKDEEFSWSSYIKQSKAQAAPKALFENQNTTVTPLGFRIGM
KLEAIDKKNPSFICVATVTDMVDSRFLVHFDNWDESYDFWCDATSPYIHPVGWCQDNNRI
LTTPPVYPSVKDFSWGKYLEETNSSPAPARAFKGKPPHSFLPLMKLETVDKRNPMLVRVA
TVVDTDDHRIKIHFDGWADDYDYWVDTDSPDIHPAGWCAKTGHPLQPPISPQELFESSGQ
GGCPTPGCKGVGHIKGARYSGHHSAVGCPYSDININKDSVLPDRLSGEMPGSGGLGRPRR
AEPNPENHSPALSADKHLSANTNHLEKPGRGEKAGSGMVKPAGTEPKRRVGRPCKQRKIE
ELVEAEDMKSEVPCIIETKVELTLQEALHQSVFMPCTSPSPSSTPFCWDQHSKLLPTVAG
ITSSKVAVWTVEEVIEFIQGLPGCKEHVHTFRDEQIDGEAFLLLTQVDLVRIMSIKLGPA
IKIYNSILMFKTAEESACNEL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctacagacaccacaaatgcagtagcccctgattttgatgtgtatggtgcc
atggactggaatgatggtgttggaaccttacctgggagtgagctaaagtttaaggtgaat
gagtttggagtcttggaggtcctatcagaggagggtgatgatgagagggtaaagaaggct
caagccaccactacatggatagtgcccactgctcaggaggccctctcagacagtttgtct
gtggcagtgaaagaggagaggcaggaggggcagtgggtccagagaggccgtgtgtgtgtg
cgctgccagaggacgggctcccccgtggacttcctgtctgactgccttcactgcagcgag
cgctgtctgcagcaggaccagcaggatgagctgaagctgaagaaagaggtgtctaagagc
aatggggaggtggtgggggtcagccgtaagaggcctctgcagcaggacaagaagagccta
gcagacaagatggataccacagaggtcctgcctgaggaccatgatgaggactatgaggag
aaagacagcaggaagacgacgcgtggagctccgcgaggcaggaggaaacggaggggggat
gcagccctgctgagacacactgttccatatggagggaagaagaagtcttggtgttgggcc
tcctatctggaacaggacaaagccattgctgcccccactaaactgttcaaagagcaccag
gccttccccctgagtaagaatggattccggttgggtatgaggctggagggtgtggaccca
gagcacccctccatgtactgtgtgctcacagtagctgaggtttcaggacaccgaatacgg
cttcactttgacaagaactcggactgctatgacttctgggtgaattccaactctgcagac
atccaccctgtgggatggtgtgagaaaacgggacacaagcttcacccccccaaaggtatg
aaggatgaggagttcagctggtcgtcgtacatcaaacagagcaaagcccaggcagctccc
aaggccctgtttgagaatcagaacacgactgtcacccctttaggatttagaattgggatg
aagctggaggccattgacaagaaaaacccctccttcatctgtgttgccacagtaacagac
atggtggacagtcgattcctggtgcactttgataactgggatgagagctacgacttctgg
tgtgatgcaaccagtccctacatccacccagtgggctggtgtcaagacaacaacaggatt
ctcacgacccctccagtttaccccagtgtcaaggatttctcctggggaaagtatctggag
gagaccaactcatcaccggcccctgccagggctttcaaagggaaacccccccacagcttc
ctgccactcatgaagctggagacggtggacaagaggaaccccatgcttgtcagagtggcc
accgtggtagacactgacgaccacaggatcaaaatccattttgatggctgggcggatgat
tatgactactgggtggacacagacagtccggacatccaccctgcgggctggtgtgctaag
actggccaccccctccagcccccgatcagtccacaggagctgtttgagtcgtcagggcag
ggcggatgtcccaccccagggtgtaaaggtgtgggccacatcaaaggagcccgctactct
ggacaccacagtgcggtgggatgcccatactctgatatcaacatcaacaaggactcagtg
ctgccagaccgtctgagtggtgagatgccagggtcaggaggactgggccgaccccgacgg
gcagaacccaacccagagaaccactcaccagctctcagtgcagacaagcacttaagcgcc
aacacaaatcacctggaaaagcctggcaggggagagaaggctggcagcggcatggtgaaa
cccgccggcacagagcccaagaggagggttgggcggccttgcaagcagaggaagatagag
gagctggtggaggcggaggacatgaagagtgaggtgccatgcataatagaaaccaaagta
gagctgacactacaggaagcccttcaccagtcagtgttcatgccatgcacctcgccatcc
cctagcagcactcctttctgctgggaccagcacagcaagctgctacccaccgtggctggc
atcacttcaagcaaagtggctgtgtggacagtggaggaggtgattgagttcatccaaggt
cttccaggctgtaaggaacacgtgcacacattcagagatgagcaaatagatggcgaagca
ttcctgctgttgactcaggttgacctagtgaggatcatgagcatcaagctgggtccagcc
atcaagatctacaactccatcttgatgttcaagacggcggaggaatcggcatgtaatgag
ctttaa
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