Coregonus clupeaformis (lake whitefish): 121552822
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Entry
121552822 CDS
T08357
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121552822 (brf1b)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
121552822 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Motif
Other DBs
NCBI-GeneID:
121552822
NCBI-ProteinID:
XP_041721812
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All DBs
Position
36:complement(13270813..13395411)
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AA seq
705 aa
AA seq
DB search
MTSRICKNCGCSEIDLDQARGNAVCTSCGSVLEDNIIVSEVQFVEGSGGISSAVGQFVSA
DGPVKAPVLGTGFHTSLGKESRAQTLQNGKRQIHNLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINSPA
IDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKDVIGVVKVCEATLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSFTAGQRK
VKMQALEQELAKKLDEVQGEISLYRDEIETELENSRPKLRGIYAAYAKEIDPLDEVLSQA
SCASPREVDPEEDEELEAVAQHLNQDFLCQVIQGEKQGDERGGEGGTEEAPPPPPPPRGG
PSLASILGPLPSAASLGLSESIQECIAEDKDSDGKSESGELDLDGIDDKEIERYILNDKE
VRVKTDLWMKQNEEYLREQKEKEERIAKEKEQGTYKEKPKKTSKKREPIRASTAGEAIEK
MLEQKKISSKINYDVLRDLNSKVGSGNSSPARPTSTEEPPSGPPGRKRLTRRKKQPNKTN
MGLATPASIMGKRLRPLISSAPKKKRAASQVTPNLTPAATPALPTLSSPPTPTPPGPTMV
ESGPVAYDEAAEEEEEEEVEEPCVSAWQLLGGNEYGCEAEEEEVF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgcatatgcaagaactgtggttgttccgagatcgacctcgaccaggctcgg
ggcaatgcagtatgtacgagctgtgggtctgtgctggaggacaacatcatcgtgtccgag
gtgcaattcgtggagggcagtggtgggatttcgtcagccgtggggcaattcgtctcagca
gatggtccagtgaaagccccagtcctgggtactgggttccacaccagccttggaaaggag
tcccgtgctcagacgctgcagaacggcaagcggcagatccacaacctgggcagccagctg
cagctcaaccagcactgcctggacacagccttcaacttctttaagatggtggtgagcaag
cacctgacgcgcggacgcaagatggcgcacgtcatcgctgcctgcctctacctggtctgc
cggactgagggcacgccccacatgcttctggacctgagtgatctcctacaggtgaacgtg
tacatcctagggaagaccttcctcctgctggctcgagagctctgcatcaactccccagca
atagacccttgcctgtacatccctcgttttgcccacatgctggaatttggggagaagacc
catgaagtgtccatgacggcactgcgcctactgcaaaggatgaagagggactggatgcac
acgggccgcaggccctctgggctgtgtggggcagccctgctggtggctgcccggatgcac
gagttccgccgcaccgtcaaggacgtgattggagtggtgaaagtgtgcgaggccacactg
aggaaaagactgacagagttcgaggacactcccaccagtcagctgaccatcgatgagttc
atgcgggtggacctggagcaggagtgtgacccaccctctttcactgctggacagaggaag
gtcaagatgcaggcgcttgaacaggagttagccaagaagctggatgaagtgcaaggtgaa
atcagtttgtaccgagacgagatcgagacggagctggagaacagcaggccaaagctcaga
gggatctacgctgcctatgccaaagaaatagacccgctggatgaggtgctttctcaggcc
tcatgcgccagccctagggaggtggaccccgaggaggatgaggagctggaggcagtcgcc
caacacctcaaccaggacttcctctgccaggtcatccagggggagaagcaaggggacgaa
agagggggagaaggagggacagaggaggcaccccctccacctccaccacccagaggaggc
ccctccctggcttccatcctgggtcccctgcctagcgcggctagcctggggctcagtgag
tccatccaggagtgcatcgcagaggacaaggacagcgatggcaagtcagagagcggggaa
ttggacctggacggcatcgacgataaagaaattgagaggtatatcctcaacgacaaagaa
gtgagagttaagacggatctgtggatgaagcagaatgaggaatatctgagggagcagaaa
gaaaaggaggagaggatagctaaagagaaagagcaggggacctacaaggagaagcccaag
aaaacgtccaagaagcgggagcccatccgtgccagtacggcgggcgaggccatcgagaag
atgctggagcagaagaagatctccagcaagatcaactacgacgtgctgcgtgaccttaac
agcaaggttggcagcggcaacagcagccccgcccggccaacctccaccgaagagccaccc
agtggcccccctgggcggaagaggctgacccgccgcaagaagcagcccaacaagaccaac
atgggcctggccacccccgccagcatcatgggcaagagactccgtccacttatatcctct
gcgcccaagaagaagagagccgcttcacaggtgacccctaacctgaccccagctgcaacc
cctgctctgcccacgttatccagcccgcctacccccacccctccaggacccaccatggtg
gagagtggcccggtggcctatgacgaagcggcagaggaagaggaggaggaagaagtggaa
gagccctgtgtcagtgcgtggcagctcctgggaggaaatgagtacggctgtgaggctgaa
gaggaagaggttttctag
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