Coregonus clupeaformis (lake whitefish): 121552889
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Entry
121552889 CDS
T08357
Symbol
zfp36l1b
Name
(RefSeq) mRNA decay activator protein ZFP36L1b
KO
K18753
butyrate response factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121552889 (zfp36l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121552889 (zfp36l1b)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121552889 (zfp36l1b)
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Gene cluster
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
zf-CCCH_UNK-like_4th
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
121552889
NCBI-ProteinID:
XP_041721915
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All DBs
Position
36:28357109..28363608
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AA seq
368 aa
AA seq
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MTASIVSPFFDYYEINKNNKMFNYNNNTFGGPHSTSVPVCTGANNPPTGSLLDRKVVGVP
SAGGSGLFQRRHSVTLPNAKFNQNQFINSLKADPSSLLSGGGGSNNKENRFRDRSFSETG
DRLKPGSQLQCLGGGQSQGQQQQQVNSSRYKTELCRPFEENGTCKYGDKCQFAHGMHELR
SLSRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPPPFSSFNKMERPRLQHSFS
FAGFPSQGGLQDSPTSVTPPPIFTTEDLSEWPSNPFTYSSQELVNLFGPSLVGGPPVLEP
NLLAPAPPSPPPPCFFRPMSESPPSPPDSLSDQEGYQSSLGSQSGSDSPSLDASRRLPIF
SRLSISDD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaagtatcgtttctcctttcttcgactactacgaaattaacaagaacaataag
atgtttaactacaacaacaacactttcggtgggccccactccacgtctgtcccagtctgc
actggtgccaacaacccccccactggttccctgctggacaggaaggtggtgggggtcccc
tctgcagggggcagtgggctgttccagcgccgccactcggtcaccctccccaatgctaaa
ttcaaccagaaccagttcatcaatagtctcaaggcagacccctcctcgctcctgagtggt
ggtggtggcagtaacaacaaggagaaccgcttccgggaccgctccttctctgagaccggg
gatcgcctcaagccgggcagccagctccagtgccttggcggcgggcagagccagggccag
cagcagcagcaggtcaactccagccgctacaagacggagctgtgccggcccttcgaggag
aacggcacctgcaagtacggcgacaagtgccagtttgcccacggcatgcacgagctgcgt
agcctgagccgccaccccaagtacaagacggagctgtgccgcacattccacaccattggc
ttctgcccctacggccctcgctgccacttcatccacaacgccgaggagcgccgcggcccg
ccaccacccttctccagtttcaacaagatggagcgcccccgcctccagcacagcttcagc
ttcgccggcttccccagccagggcggtctacaggacagccccacctcggtcaccccgccg
cccatcttcactacagaggacctgagcgagtggcccagcaaccccttcacctactccagc
caggagttggtcaatctgtttggccccagcctagtaggggggccccctgtcttggagccc
aacctgctggccccggcgcccccctccccccctcccccctgcttcttccggcccatgtcg
gagtctccccccagtcccccggactctctctccgaccaggagggctaccagagcagcctg
ggcagtcagagtggctccgactcccccagcctggacgcctcgcgccgcctgcccatcttc
agcaggctctccatctctgatgattag
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