Coregonus clupeaformis (lake whitefish): 121553175
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Entry
121553175 CDS
T08357
Symbol
smap1
Name
(RefSeq) stromal membrane-associated protein 1 isoform X1
KO
K12486
stromal membrane-associated protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121553175 (smap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121553175 (smap1)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121553175 (smap1)
Endosome - Golgi transport
Arf GTPase associated proteins
121553175 (smap1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
SR-25
Afi1
Motif
Other DBs
NCBI-GeneID:
121553175
NCBI-ProteinID:
XP_041722048
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All DBs
Position
37:26218466..26268589
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AA seq
469 aa
AA seq
DB search
MSTRSEREKAQKLNEQHQAILTKMLREDDNKYCADCEAKGPRWASWNLGVFMCIRCAGIH
RNLGVHISRVKSVNLDQWTQEQIQSMVDMGNNKAKHLYEAHLPDNFRRPQTDQAVEFFIR
DKYERKKYYDQNGLKTASKSSDAAASSTSPASQAAEKNRQEKEREKKKREKEVVNRPSSS
EKKVELQTDSRASPKRSPEPAIDLLGMDAPAGGAATSATAAPVSDEDIFGPMVSNPLPSC
NNTQAVSSAAPGAPAVAAPARGSGGAAGPQANLDLFSEKNSSSTKTEEGAKKPLSKDSIL
SLYSNTTVSPQPAGPAAAMYMGQPPMQQFPSQPSGQPNFQTYPGMGGAMPPTTMTGGVMA
QGGGAMMGQNSGIMVSMAMPNGYMGMQQGMMGPQGGAMPAGAGTPQMYTAMQQQQQQGQW
NVNQMTQQMSGIAMSGGVAVPPGFVQPGAPVGRGVGPPSGQTLSTQLWK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcggtcggagagagaaaaagcccagaaactgaatgagcagcatcaggccatt
ctgaccaaaatgctccgagaggacgacaacaagtactgcgctgactgcgaggctaaaggt
ccgcggtgggcatcgtggaacctgggggtcttcatgtgtatccgctgtgctggcatccac
aggaacctgggcgtccacatctccagagtcaaatctgtcaacctggaccaatggacccaa
gaacagatccagagtatggtagacatggggaacaacaaggccaaacatctgtatgaagcc
cacctcccagacaacttcagacgtccacagaccgaccaagcagtggagttcttcatccgg
gataagtacgaaaggaagaaatactacgaccagaacggcctcaaaacagcttcaaagtct
tctgatgctgctgcctcctctacctctcccgcctcgcaggctgctgagaagaacagacag
gagaaggaacgagagaagaagaagagggagaaggaggtagtgaacagaccaagctcctct
gagaagaaggtggagcttcagacagactccagagccagtccaaagaggagccccgagccg
gccattgacctgctaggcatggatgcacctgcaggtggagctgcaaccagtgctactgct
gcaccagtcagcgatgaggacatctttggtccaatggtgtccaaccctctgccctcctgc
aacaacactcaggcggtctccagtgcagccccaggcgccccagcagtagcagcacccgcg
aggggatcggggggtgcagctggcccccaggctaatctggacctcttcagtgagaagaac
agtagtagcaccaagacggaggagggggccaagaaacccctctccaaggactccatcctc
tccctctacagcaacactacggtcagcccacagcctgctggcccagctgctgctatgtat
atgggccagcctccgatgcagcagttccccagccagccctccggacagcctaacttccag
acttaccccggaatgggcggcgctatgccacccaccaccatgacgggcggggttatggcc
cagggaggaggagccatgatggggcagaactctggcataatggtcagcatggcgatgccc
aacggttacatgggcatgcagcaaggcatgatggggcctcagggtggagctatgccagcg
ggggcggggactccccagatgtacaccgccatgcagcagcaacaacagcagggccagtgg
aatgtgaaccagatgacccagcagatgtcgggcatcgccatgagtggtggtgtggcagtg
ccacccggctttgtccaaccaggtgctccagtgggcaggggggtgggacccccctcgggc
cagaccctcagtacccagctgtggaagtga
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