Coregonus clupeaformis (lake whitefish): 121553179
Help
Entry
121553179 CDS
T08357
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03430
Mismatch repair
cclu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121553179 (mlh1)
03460 Fanconi anemia pathway
121553179 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121553179 (mlh1)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121553179 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121553179
NCBI-ProteinID:
XP_041722070
LinkDB
All DBs
Position
37:complement(6158493..6178739)
Genome browser
AA seq
736 aa
AA seq
DB search
MSGVILRLDETVVNRIAAGEVIQRPANAIKELLENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLNSISTYGFRGEALASISHVAHVTITTKTADAK
CAYSLSTALTLTLTRATYCDGKLKTQPKPCAGNQGTQITAEDLFYNVSTRRKALKSPSEE
YSRIVEVVSRYAIHNSGKSFAVKKQGETMADVRTLPNASILDNIRVVFGNTVSRELIEVG
CEDQKLAYKLKGHISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNTHPFL
YLSLEIAPHNIDVNVHPTKHEVHFLHEDCIIESVQKHIESKLLGSNSSRTYFTQTLLPGL
SVSTSEGKPSSSSTGDSERVYAHQMVRTDSRAQKLDAFLQPASKLVPTPTANLNGRSRGE
PVTTNDMEEMDNAEILQEQAHGTTDDGEGTSLNTPADLPRKRPRAGQDEEQEELTAAATT
RRRAIKLSSVKKLRDDIAEHAHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLS
QELFYQILIYDFGNFGILRLSEPAPLYDMAMLALDSEESGWSEDDGPKEGLAQYIVDFLK
KKSEMLEDYFSMEIDQEGNLTGLPLLLDKYTPPMEGLPMFILRLATEVNWDNEKDCFRDF
SKECSQFYSIRKQYVLEVEPGEEEQDAELNSWRWKVEHLLFKAFRSLFSPPKHFSEDGSV
LQIANLPDLYKVFERC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggtgattctgagactcgatgagaccgttgttaatcggattgctgctggagaa
gttatccaacgtcctgctaatgctatcaaagaattgcttgaaaactgtttagatgccaag
tccaccaacatacaagtgactgtgaaggaggggggtctgaaacttatccagatccaggac
aatggcactggcatcaggaaagaagatatggaaatagtatgtgaacggtttacaacaagc
aagctccagacttttgaagacctcaactctatctcaacctatggtttcagaggagaggca
cttgccagtataagccatgttgcccatgtgaccataacaaccaaaacggctgatgccaag
tgtgcttacagtctaagtactgccctcaccctcaccctcaccagagccacctactgtgat
gggaaactaaagacccaacccaaaccctgcgctggaaaccaggggacacagatcactgcg
gaggatctgttctacaacgtgtccaccaggaggaaagccctaaagagccccagtgaggag
tactccaggattgtggaggtggtgagcaggtatgcgatacacaactctgggaaaagcttt
gctgtcaaaaagcaaggcgagaccatggcagacgtcaggaccctacccaacgcctccata
ctggataatatccgtgtggtgtttggcaatacagtcagcagggagctgattgaagtgggc
tgtgaggatcagaagcttgcctataagttgaagggccacatctccaacgccaattactca
gtgaaaaagtgcatcctcatcctcttcatcaatcatcgtctggtggaatcgagtgcctta
aaaaaagccattgagaccgtttatgctgcataccttcccaagaacactcacccatttcta
tatctcagcctggagattgcccctcataacatcgacgtgaatgtccaccctaccaaacac
gaggtgcacttcctccacgaagactgtatcatcgagagcgttcaaaaacacatagagagc
aaactcctgggctccaactcctcacgcacatacttcacacagacattgctgcctgggctg
tccgtctccaccagcgaggggaagccttcctccagctccacaggggacagtgagcgggtc
tacgcccatcagatggtgaggaccgacagtagagcccaaaagctggacgcctttctccag
ccggcatccaagctggtccctactcccactgccaaccttaatgggcggagcaggggggag
cctgtgaccaccaatgacatggaagagatggacaatgcagagatcctgcaggaacaggcg
catggtaccacagatgatggggagggaaccagcctaaatactccagctgatctccccagg
aagcgtccccgtgctggtcaggatgaggagcaggaggaattgactgctgcagccacaacc
aggagacgagccatcaagctgagcagtgtgaagaagctgagagatgacatcgctgagcac
gcacacaaaggtcttcaagagatgcttcagaatcactcgtttgtgggctgtgtcaacccc
cagtggactctgatccagcaccataccaaactgtaccttctcaacaccaccaaactcagc
caggagctattctaccaaattttgatctacgacttcggcaactttggcatcttgaggtta
tctgagcctgcgccactctatgacatggccatgcttgctctggactccgaggagagcggc
tggtcggaggatgacgggcccaaggagggtctggcccagtacatagtcgacttcttgaag
aagaaatctgagatgctggaggactacttctccatggagatagaccaggaaggaaatctc
actggtttgccattgctgcttgacaagtacacccctcctatggagggtctgccaatgttc
atcctacgtttggctactgaggtgaactgggataatgagaaggactgcttcagagacttc
agcaaggagtgcagccagttctactctatcaggaaacagtatgtcctggaggtggagccg
ggagaggaggagcaggatgcagagctgaactcgtggcgttggaaggtggagcatctcctg
ttcaaagccttccggagcctcttcagtccccctaaacatttcagtgaggatggcagcgta
ctccagattgccaacctaccggacctctacaaagtgtttgagcggtgctaa
DBGET
integrated database retrieval system
