Coregonus clupeaformis (lake whitefish): 121553181
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Entry
121553181 CDS
T08357
Symbol
gabbr1a
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid type B receptor subunit 1
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121553181 (gabbr1a)
04082 Neuroactive ligand signaling
121553181 (gabbr1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121553181 (gabbr1a)
G protein-coupled receptors [BR:
cclu04030
]
Metabotropic glutamate receptor family
GABA
121553181 (gabbr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
DUF6377
NEMP
DP
DUF3995
PhoLip_ATPase_C
Pox_P21
Motif
Other DBs
NCBI-GeneID:
121553181
NCBI-ProteinID:
XP_045082492
LinkDB
All DBs
Position
17:complement(74018438..74083568)
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AA seq
998 aa
AA seq
DB search
MAQLLFLIIMYAVPSLVVAIHNSTTGGCAIIRPPRDGGIRYRGLTQEQIRNVQILPVDYE
IEYICRGNRVIVGPKVRKCLPNGTWTDITLHSRCLLLCPRVWTSLENGRVALKPPGPPVE
GTVLHYSCHAGFMLEGRNITHCTKLGKWDSPKPVCLYDRNYKGKKKLYIGALFPMSGGWP
GGQACLPSAQMALDLVNNRTDILPDYELELIYYDSMCDPGESTKLLYDLLYTEPIKTVLM
PGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRNRFPTFFRTHPSATLHNPTRVRLFQK
WKWTKIATIQQTTEVFTSTLDDLEQRVKEAGIEISVRQSFLTDPAVAVKNLKRQDARIIV
GLFYETEARKVFCEVFKEKLYGKKYVWFLIGWYADNWFKIKDPSINCTIENMTEAVEGHV
TTEIVMLNPETVRGASNLTSQEFLGALMNRLGGKNPEETGGFQEAPLAYDAVWALALALN
KTVAPLKAKGRRLEDFNYNNHDITAEIYRALNTSSFEGVSGHVVFDAQGSRMAMTLIEQL
QGGSYKKIGYYDSSQKNLSWFGNDVWIGAGPPADSTIVIEEFRYLSQKLFAAVSVFAGLG
ILLGIVCLTFNIYNSNVRYIQNSQPYLNNMTAVGCMMALAAVFPLGIDGHHIHRSQFTVV
CQFRLWLLGLGFSLAYGSMFTKIWWVHNLFTKKEEKKEKRKHLEPWKLYATVGVLLAIDV
LSLMIWQIVDPLHITVEKFTREAPKGDLDVLIQPLLEHCTSEKMNTWLGVVYGYKGLLLL
LGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCMITAPVTMILTSQQDASFAFAALAIV
FSVYITLVVLFVPKMRRLITRGEWQSEQQDTLKTGSSTNNNDEEKSRQLERENRELQKII
QEKEQRVSELRNQLVERQALRNRRRPSSGTNQNHSTPSPPSSQPDPKSLLPPPGYPNPAS
DNHSSLPPSFSNSSNLYQADSKISRNHCHNSQIPLLYK
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctattgtttcttataattatgtatgctgtgccatctcttgttgtggccata
cataattcaacaactggaggctgtgccatcatccgtcctcccagagatggaggcatccgc
tacagaggcctgacacaagaacagatccgcaatgtgcagatcctaccagtagactacgag
atagagtacatctgcagggggaacagggtcatagtgggccctaaggtcaggaagtgcctt
cccaatggcacatggaccgacatcacactgcacagcagatgtctgctgctgtgccctcgt
gtgtggacgtccctggagaatgggagggtggcgttgaagccccctgggccaccggtggag
ggaaccgtgctgcactacagctgccatgctggcttcatgctggagggcaggaacatcaca
cactgcaccaagctgggcaagtgggactcacccaaacctgtctgcctctatgacagaaac
tacaaaggcaagaagaaactctacatcggagctctcttcccaatgagcggcggttggccg
ggcggccaagcatgtctcccctctgcgcagatggctttggatctggtgaacaaccgaacg
gatattctgccggattacgaactggagctgatatactatgacagtatgtgtgacccgggt
gagtccaccaagttgctctatgacctgctctacacagagcccatcaagacagtcctgatg
cccggctgcagctccgtatccacactggtagcagaggctgctcgcatgtggaacctcata
gtgttgtcctatggctccagctctccagccttgtccaacaggaaccgtttccccaccttc
ttccgcacccacccctcggccaccctccacaaccccaccagggtacgcctcttccagaaa
tggaagtggactaagatcgccaccatccagcagaccacggaggtcttcacttcgactctg
gatgatctggagcagagggtgaaggaggctgggattgagatcagtgtgagacagagcttc
ctcaccgacccggctgtcgctgtcaagaacctcaagcgtcaggatgccagaataattgtg
gggctcttctatgagacggaagccaggaaagtgttttgtgaggtatttaaagagaaacta
tatggcaagaaatatgtgtggtttctgattggctggtacgctgataactggttcaagatc
aaagacccgtccatcaactgcaccatcgagaatatgaccgaggcggtggaggggcatgtt
accacggagatcgtcatgctcaaccccgagaccgtccgcggagcctccaacctgacctct
caggagttcctgggggcgttgatgaaccggctggggggtaagaacccggaagagacgggg
ggcttccaggaggcccctctagcctacgacgctgtctgggccttggccctggccctcaac
aagactgtggcccctctgaaggccaaaggccgcaggctggaagacttcaactacaacaac
catgacatcacagcagagatctaccgcgccctcaacaccagctcatttgaaggcgtgtct
ggtcatgtggtgtttgatgcccagggttccaggatggctatgacccttattgagcaactg
caagggggcagttataagaagattggatactacgacagctctcagaagaatctctcctgg
ttcggcaatgacgtgtggataggcgccgggcctccggctgactcgacaatagtcattgag
gagtttaggtacctctctcagaagctgtttgctgctgtgtctgtcttcgctggtctgggc
atcctcctgggcatcgtctgtctgaccttcaacatctacaacagcaacgtccggtacatc
cagaactcccagccctacctgaacaacatgacagcagtgggctgtatgatggccctggct
gctgtgtttcccctggggatcgacggacaccacatccacaggtcccagttcactgtggtc
tgtcagttccgtctgtggctgctcggcctgggcttcagtctggcctatggcagcatgttc
accaagatttggtgggtacacaatctcttcacaaagaaggaggagaagaaggagaagagg
aagcacctggagccatggaaactctatgcaacagttggagtgttactagccatagacgtc
ctgtcactcatgatttggcagattgtggatcctttacacatcacagtggagaagttcact
agggaggcccctaaaggagacttggatgtcctgattcagcccctcctggagcactgcacc
tcagagaagatgaacacatggctcggtgtagtgtatggctacaagggactgctgctgttg
ctggggatatttctggcctacgagaccaagtctgtttccacggagaagatcaatgaccat
cgagccgtggggatggctatttacaacgtggctgtgttgtgcatgatcacggctcccgtc
actatgatcctcacgtcacagcaggacgcttcctttgcctttgccgctctggccatagtg
ttctctgtctacatcaccctggtggtgctctttgtgcccaagatgcgcaggctgattaca
cgtggtgagtggcagtcggagcagcaggacacgctgaagaccggctcgtccaccaacaac
aacgatgaggagaagtctcgccagctggagagagagaaccgtgagctgcagaagatcata
caggagaaagagcagagggtatcggagctccgcaaccagctggttgagagacaggccctg
cgcaaccgacgacggccctcatccggcaccaaccagaaccacagcaccccgtccccgccc
tcttcccagccagaccccaagtctctcctgccccctcccgggtaccccaaccccgcgtcg
gacaatcactcctccttacccccctccttctccaactcctccaacctgtaccaggcggac
agcaaaataagtcgcaaccactgtcacaacagccagatccccctgctttacaagtga
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