Coregonus clupeaformis (lake whitefish): 121553190
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Entry
121553190 CDS
T08357
Symbol
mypn
Name
(RefSeq) myopalladin isoform X1
KO
K22028
myopalladin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121553190 (mypn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121553190 (mypn)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121553190 (mypn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
121553190
NCBI-ProteinID:
XP_041722115
LinkDB
All DBs
Position
37:6346633..6397922
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AA seq
1928 aa
AA seq
DB search
MQENNVDQPTSLSQLLRENYLAEARAHQRHSEMSRSDSSSRRLVYGPLKGKTADSAGQDE
PQHQLPDLSAFLSQEELDKSVNLACQAIGHEAREERPDVKASVAPSATTAASDTPDTQSD
PELEEPLPTHPIFLPERRPYPPLSLQDNAIRTDEQTYQPSQLSIQDNVMRTDRQMFPPSI
IQDIAMKNNREDIKRPGAGGRNTQSFGLENQSKKEFLNKAADFIEELSSLFKANSSKRIR
PRTCKTHRSRANKGQADGSIYSLNADDRERPILLQDIEMEMERPANPFCIQPPEVQGLGM
DPGYGHADFPMQDCRTTEEQYDDSEVLEADELDEAESPAMVEITPGVYTADPICEPPHFI
QKLKSREVSEGSKVQLDCIVRGLPMPEVRWFCEGKELENCPDIQIINNDELHSLIIAEAF
EEDTGRYSCFASNFYGTDSTSAEIYIEGASSTDSEGEQHFEQVAQLQRTPAQPAAPSLRP
VVCAVSVCEEDTPICTEDQPQEATSLPSSQVVTASVPVKVTTTVLPVTDVTATPTQVAFT
LSPAQETSAPLPVQVVCTLDLPPVDIVSVLAQEVSTPSLSTPSPVPVTSAPLPTKAVTTT
ALPLTQVVSSTLPAQVAPIQMTLSENLNGDSYNRGLDVYPQGLDGRPIIAAPVFTKSLQD
LLASENQLVVLECRVKGVPSPKVDWYREGTVIEDSPDFRILQKKPRSMAESEEICTLVIA
EVFPEDSGTFTCTASNKYGTVSSIAALRVKGNDNTNSNHVKTPHKSTQVPEPSSLDLTPP
SLKPQAEVPVTNSIKPHSSTIRLDPLSSSTLRLDPLTTSTLRLDPLSSSMLRQDPVSISM
PSLDPLSLGSSPRIGTRSSSTSCLDPLYLSTPHPDLPTSSSRLHPEPQSSGEVPKTDHED
SRAFSVLSDPAIGLSPKVEGTPFHKPEPPPPVNLPDPPTSSCLKPGVLVSHNGPRSSSRV
GLRVHFKLPEDETDNESETSDSHSYEDMSQLANKEPPPVLAKPKLDPVQLQLLHNQVLME
QQQTDTEPTGATQSQPEASAWPARKQPEPQAQLQHQQSLPRSSTPMPLQSTHPAPILAIA
PTPLLNFTPVTTLNTTPAPQLNTSPPAPQLNIASAPLLNPYATHSYFPSSSSSSLPLLNT
SPVSPINTTSALLQNTAPPAPVMGTLPSPPQLKTGSSFMSSPPSAPLLSTVPAPHLYTIP
ASPPYMTLQNTTHSSQLNLAPLSLPKTIHVPQFNTPLVPHLNTAPTASLSTIPAAFNRAP
TTVQNTSPSPLLRTTHASLLNLAPTSQSFNYARPKEFITTQTPLSPVRSPSPTESPVPLL
HELAAELNSSNPNLFSPQPRVFPTRVLKSPTSPPSFMSSPTSPTLLPAAYLNSVFTLPQQ
SPPQAASPTSSTSTPSPIQNHVAFLSSVLPSLHTTQATNSMGLPRSAHGPPQGMQKKLPT
STRPMSDVDIRSSQQTLLQDMEKKLRFNEDVMRGHVQQKQTTYEGKTVRRPLGPNIPATV
FNYDEEYKVSNFEQRLMSEIEFRLERTPVEESDDEVQHDESPTGKCIAPIFDKKLKNFRA
MEGVPMTFSCKVVGIPVPKVYWFKDGKQILRKNDHYKKIREGDGTCALHIEVTNNDDDGN
YTVMAANPQGRISCSGHLIIQTGPLRNRMTPMIHSQRVRARIQEVEEGEPTQERFFRPHF
LQAPGDMVAHEGRVCRLDCKVSGLPNPELMWLINGRPIYPDFYHRMLVRENGIHSLVIDP
LKQDDAGTYTCIASNKAGQSSFSLELRVVEKEMKQAPQFVEKLQNTGIAEGTPVRLECRV
LGMPPPVIYWKKDNDTIPHTKARVSIHQDATGYVCLLIQPTRKEDAGWYTVSAKNEAGIV
SCTARLDIYAQWHKHVPLPMKKALRQGSRYAVLTGQGLDIKSAFPTMDNSPVLFSSSPVE
AQLESEEL
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaacaacgtggaccagcctacatcattatctcaactcttgagagagaactac
ttggccgaagcgcgagcacaccagagacacagcgagatgagtcgttccgactcctcctca
cggcgcctggtctacgggcccctcaaaggcaagacggcggactctgcggggcaggatgag
ccccaacaccagctcccagacctctcagcattcctgagtcaggaagaactggataagagt
gttaacctggcctgtcaggctatcggacacgaagcccgtgaggagaggccagatgtcaag
gcctccgtcgccccctctgccaccaccgccgcatctgacactcccgacacccagtctgac
ccggaattagaagaacccctaccaacacacccaatattcttaccagagagacggccatac
ccacctctgtccctacaggacaatgcgataaggacagacgaacagacatatcagccgtcc
caactgtccatccaggacaatgtgatgaggacagacagacagatgttcccaccatccatc
atccaggacattgcgatgaagaacaaccgggaggacattaagagaccaggggctgggggg
aggaacacccaatcatttggcctggagaaccagtccaagaaggagttcctcaacaaggct
gcagacttcatcgaggagctctcctctttgttcaaagcaaacagctccaaaaggatacgg
ccccgaacgtgcaaaactcataggagcagagccaacaagggccaagccgatgggagcatt
tattccctgaacgcagacgacagggaacggccgattcttctccaagacatcgaaatggag
atggagaggcctgctaatcccttctgcattcagccgccagaggtccaaggtttgggcatg
gacccaggatatgggcacgctgacttccccatgcaggactgccggactactgaggagcag
tatgatgactctgaggtgctggaggcggatgaactggatgaggctgagagccctgccatg
gttgagatcacccctggagtgtacacagccgaccccatctgtgagccccctcacttcatc
cagaaactgaaaagcagggaggtgtcggagggcagcaaggtccagctggactgcattgtt
cgaggactccccatgcccgaagtccggtggttttgtgaggggaaggagctggagaactgc
cctgacattcagatcatcaacaacgacgagttgcactctctgatcattgccgaggcattc
gaggaagacacagggcggtactcttgctttgcttccaacttctatggcacagattcaaca
tctgcagaaatctacatcgaaggtgcctcctctacagattcggagggggaacaacatttt
gaacaagtagcacagctgcagaggacccctgctcagccggctgctccgtctttacgtcca
gtggtctgtgctgtgtctgtgtgtgaggaagacacacccatctgtactgaagaccagcca
caggaggccacctcactgccgtctagccaggtagtcactgcatctgtgcctgtcaaggta
actactactgtccttcctgttacggacgtgacagcaacacccacccaggtggcgtttaca
ttgtcccctgcccaggagacgtcagcaccgttacctgtccaggtagtctgtactctagat
ctaccacctgtggacatagtgtcagtactggcgcaggaggtgtcaacaccgtcactgtca
acaccgtcacctgtcccagtgacgtccgcaccattaccgacaaaggcagtcactaccacg
gcactaccactgacccaggtggtttcctctacactgcctgcccaggtggctcccatacag
atgactctgtctgagaacttaaacggtgacagctataaccgaggtctagacgtctatcct
caaggtctagacgggaggcctatcatcgctgcccctgttttcacaaagagtctgcaggac
ctgttggcgtcggagaaccagctggtggtgctagagtgccgtgttaaaggggtgccctca
cccaaggtggactggtacagagaaggaactgtcatagaggactcccctgacttcaggatc
ctgcagaagaagcctcgatccatggctgaatcagaggaaatatgcactttggttattgct
gaggtcttccctgaagattctggaacgttcacttgcactgcaagcaacaaatatggaact
gtatccagtatcgctgcactaagggtgaaaggcaatgataacaccaacagcaaccacgtg
aaaactccacacaagtccacacaagttccagagccctcttcattagatctcactcccccc
agtctaaagcctcaagctgaggttcctgtgaccaacagcatcaagcctcactccagcacc
atccgcctggatcccctcagttccagcacgttaagactggaccctctgaccaccagtacc
ctccgtctagaccctctgagctccagcatgctgcgccaggaccctgtcagcatcagcatg
cccagcctggacccactaagcctgggcagcagccccaggataggcacccgtagctccagt
acatcttgtctggatccactctacctgagcacccctcacccagacctgcctactagctcc
agcaggctacaccctgagccccagagcagtggtgaggtgcctaagactgaccatgaagac
tccagagccttctcagtgttatcagaccctgccattggtctgagtcccaaggtggaaggg
actcctttccataaacctgagccccctccccctgtaaacctccctgatccccccacctcc
tcctgcctcaagcctggggttctggtgagccacaacgggcccaggtccagctccagggta
ggcctccgtgtgcactttaaactgccagaggatgaaacagacaacgagagtgaaacatcc
gatagccattcatatgaagatatgtcacagttggccaataaggaaccacctccagtcctg
gccaagcccaaactagaccctgtccagctgcagcttctacacaaccaggtgctcatggag
cagcagcagactgacactgagccaaccggagccacccagagccaaccggaggcatctgcc
tggccagcccggaagcaacccgagccccaggcccagctccagcaccagcaaagcctgccc
cgttcatctaccccaatgcccctgcagtccacccaccctgcacccatactggccatagcc
ccaacacccttactcaacttcacccctgtgacaacactgaacactacccctgcaccccag
ctaaacactagtccccctgcaccccagctaaacattgcctctgcaccactactgaaccca
tacgccacccattcttattttccttcttcttcttcttcttctttacccctgctaaacaca
agcccggtatcaccaataaacactacctctgcactgctacagaacacagcccctcctgca
cccgttatgggtaccctgccgtcccctcctcaactgaagacaggttcatcttttatgagc
tcccctccatctgcccctctgctgagcactgtccctgcaccccacctgtataccattcct
gcatccccaccctatatgaccctgcaaaacaccacccattcttcccagctgaacttagcc
cccttatccctgcctaaaactattcacgtaccccagtttaacacacctctcgtacctcat
ctgaatacagcccccacagcatctctcagcaccatcccagcagctttcaacagggcccct
acaaccgtgcagaacacctccccctcccccctactcagaacaactcatgcctccctcctc
aacctggcccccacttcacagagcttcaactacgccaggccaaaggagttcatcactacc
cagactcccctttctccagtcaggagtccctcccctacagagtcccccgttccgttgctc
cacgagctggctgccgagctcaactcctccaaccccaacctgttctctccacaacccaga
gtcttccccaccagagtcctcaagtcacccactagccccccttccttcatgtcctccccc
acctctcccaccctgttgcctgctgcctacctaaactctgtgttcaccctgccacagcag
tcgcccccgcaggcagcgtccccgacctccagcacctccacccccagccccatccagaac
catgtggccttcctcagctctgtcctgccctctctacacaccacacaagccaccaactct
atgggcctgcccaggagtgctcatgggccacctcaaggcatgcagaagaagttgcctaca
agcacacgtcctatgtcagatgttgacattcgtagcagccaacaaaccctcctccaggat
atggagaaaaagcttaggttcaatgaagatgttatgcgtggtcatgtacaacagaagcag
actacttatgaggggaaaacagtgaggagacccctcggaccaaacattcctgccactgtc
tttaactatgacgaggagtacaaagtttcgaactttgagcagaggctgatgagtgagata
gagttccgtctggagcgcacgccagtcgaggagtccgatgacgaggtacaacacgatgag
agcccaacagggaagtgcatcgcacccatatttgacaagaagctgaagaacttcagggcc
atggagggtgtgcctatgacgttctcctgtaaagtggtggggatccccgtacctaaggtt
tactggttcaaggatggcaagcagatcttgaggaaaaatgatcattataaaaagataaga
gagggggacggaacctgtgccttacacatagaggtcaccaataacgacgatgatggcaac
tacactgtcatggcagctaacccccagggacgaatcagctgctccggtcatttgatcatc
caaacgggtcctctccgaaaccgaatgacacctatgattcactctcagagggtgcgggcc
cgcatacaggaagtagaagagggtgaaccaacccaggagcgcttcttccgacctcacttc
ctccaggctccaggggacatggtggctcatgagggcagagtctgtagattagactgcaag
gtgagtggcttaccaaacccagagctgatgtggctgatcaatgggaggcccatctaccca
gacttctaccaccggatgctggtgagggagaacggcatccattcacttgtcatagaccct
ctaaaacaggacgacgccgggacatacacctgcatcgcaagcaacaaagcaggacagagc
tccttcagtctggagttaagagttgtggaaaaagagatgaagcaggccccccagtttgtg
gagaagctccagaacacaggcatcgcagagggcacccccgtccgactggagtgcagagtt
ctgggcatgcctccacctgttatctactggaagaaagacaacgacaccattcctcacacc
aaggccagagtcagcatacaccaggatgccactggatatgtctgcctcctgattcagcct
accaggaaagaggatgctggctggtacaccgtatcagcaaagaatgaggctggaattgtt
tcatgcacagccaggctagacatctatgcccagtggcataagcatgtccctctgcctatg
aaaaaggctctgcggcagggcagtcgctatgcagtgctgaccggccaaggcctggacatc
aaatctgccttccccacgatggacaatagccccgtcctgttctccagctcccctgtggag
gcacagctggagagtgaggagctgtga
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integrated database retrieval system