KEGG   Coregonus clupeaformis (lake whitefish): 121553225
Entry
121553225         CDS       T08357                                 
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cclu03009]
    121553225 (rrp12)
Ribosome biogenesis [BR:cclu03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    121553225 (rrp12)
  Pre-60S particles
   Other pre-60S particles
    121553225 (rrp12)
SSDB
Motif
Pfam: RRP12_HEAT HEAT_RRP12_N ARMC9_ARM Katanin_con80
Other DBs
NCBI-GeneID: 121553225
NCBI-ProteinID: XP_041722181
LinkDB
Position
37:complement(4819840..4847823)
AA seq 1291 aa
MVKSGKLKSGAASKLKRWKKGHSSDSNPQTSRFRQAARSRFFSRPSEKSDLTVDALKLHN
ELQAGTLERGAVGQGDACMEETAEHALSDRSAGTFLSGLSDCSNLTFRKVQRFWESNSAS
HKEICAVLAAVTDVIRSQGGKETETEYFAALMTTLEAVDSGESLAAVAYLLNLVMKRVPA
PVLMSKFSDTAKALMDVMSTLASSESASALRWILSCLSTLLRKQDVTVWSYPSTLQTYHG
LLSFTVHSKPKIRKAAQHGVCSILRGGDLLFTDNAPTHHPAAATAAKFCIKEIEQAGGSK
EDTTTLHVLGLLKDLMVTFPLNAVKSCCETLLRVMTLSHVLVTACAMQVFHKLFSGKPNP
ATLSAELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLASVQSSLSLGHLPRLFST
AMSCLLSPHTQVVSAATNTLKTLLSECVAPRMEEIGPVSPTASSGNPSYVCKMFRIVEEG
LSYRFHASWPFVLQVLGCFYRAAGKHTHPVMTKSLQSLADLRSTPRFPFCGELDLAVGGA
VESMGPEVLLTAVPLNITGLEDNLEFPRSWLIPVIRDHVKNTHLAYYTAYLLPLAATLRQ
RAEDLEKAGQKLEAKVYKTLQLQIWTMLPGFCVGPLDLLVSFKGVARALGMAINERPDLR
LTICQAIRTLITKSCNTEEEKVEVGRFAKNFLPILFNVFSQQPAPGDIAPYRMAVLDTIK
VYLTVTDPQMVCTFLSKATERLSSPDSTEFIRLSVMDLMVAMAPCVDEVTMSQTFELIRP
YLENKEPHMQKKAYRVLEEMCGGEREECRSFVLSHLETLKHVLLGTLKNASSPAKRPRLK
CLIHIVKQLSEEHRDFITALLPEVIICTKEVSVGARKNAYTLLVEIGNAFIRFCGDAKEA
LEQYLLLVYVGLTGSVTMITCTVLALTRLVFEYKDSIDMGSMEHLLHNVCLLLTSRTREI
VKAALSFIKVILFVMDPKTLAGHATVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSKLPAEHHKVLVNIRKAEARTKRSRLADEDHDDSDSGDEKPKARGESIEEILAESDS
DMSDDERPKGAKNQKKPTKQKGRAWLKEGQGDEPLNFLDPTVSQRVLATNPDMKKRAKVQ
HGFKVTSDGRLIIREDDDEGDKTKDDEGEMKDILEEAGVKSIKTKKRTFQHGHYEDDMEI
EPQLKYKAGGSGIHRPLGGSRDLGGDYKAKKGKGDVKRKGKVDPYAYIPLRKAQLNRRKK
AKMQGQFKGMVRGAQKGAQSGKRMQRNKRRA
NT seq 3876 nt   +upstreamnt  +downstreamnt
atggtgaaatctggaaaattaaaatctggggccgcatcgaaactgaagcgatggaaaaaa
ggacacagcagcgactcgaacccccagacgagccgattcagacaggctgccagaagccgt
ttcttcagccgcccctccgagaagagtgacctgacagtagatgcgctcaaactgcacaac
gagctgcaggcaggaaccctggagaggggtgcggttggccagggagatgcctgtatggag
gagacagcagagcatgccctttctgataggagcgcagggaccttcctcagcgggttgtca
gactgctcaaacctcaccttcagaaaggtgcagcgcttctgggagtccaactcagcttcc
cataaagagatttgtgcggtgctggctgcggtgactgatgtgattcgatctcagggaggg
aaggagactgaaacagagtactttgcagctctgatgaccaccctggaggcagtggattca
ggggagtctctggctgctgtagcctacctcctcaacctggttatgaaacgcgttccagca
ccagtgttgatgtctaagttctccgacacggccaaagctctgatggacgtcatgtccacc
ctggccagctcagaatccgcctccgcactcagatggatcctgtcgtgcctctccactctt
ttgaggaagcaggatgttacagtgtggagttacccgtctactctgcagacataccacggt
ctgctcagcttcactgtccacagcaagcccaagatccgtaaagcagcgcagcatggtgtt
tgttccatcctgagaggcggtgacttactgtttacagacaacgccccgacccaccacccg
gctgctgcaacagccgccaagttctgcatcaaagagatcgaacaggcaggaggcagtaag
gaggacaccaccaccctgcacgtcctgggcctcctgaaggacctcatggtcaccttccct
ctcaatgccgtcaagtcctgctgtgagactctgctcagggtgatgaccctcagccacgtg
ttggtgacagcatgtgccatgcaggtcttccataagctgttcagtgggaaacccaaccct
gctaccctgtctgctgaactcaacgctcagattatcacggccctgtatgactacctgccc
agtgagaatgacttgcagcctctactagcctggctggctgtcatggagaaagcccacgtt
cacctggccagtgttcagtcgtctctaagtctggggcatctccctcgtctcttctccacg
gccatgtcctgcctcctgtcacctcacacacaggtcgtctctgctgccaccaatacactc
aagactctgctgtcggagtgtgtggctcctcgcatggaggagatcggccctgtcagcccc
accgcttcctctggaaacccttcctacgtctgcaagatgttccgtatcgtggaggagggt
ctgtcgtatcgcttccacgcctcctggccgttcgttctgcaggtgctgggctgcttctac
agagcagcagggaaacacacacaccccgtcatgaccaagtctctccagtctctagcggac
ctgcgctccacccctcggttcccattctgtggtgagctggacctggcagtaggtggtgct
gtagagagcatgggacctgaagtactgctgaccgctgtaccactcaacatcactggactg
gaagacaatctggagttccctcgtagttggttgatccccgtcatacgtgatcacgttaag
aacacgcacctggcttactacacagcatatctcctgccgctcgctgccacgctccgacag
agagctgaggacctggagaaggctggacagaaactggaggcaaaagtctacaagactctc
cagctgcagatctggaccatgctgccagggttctgtgtgggtcccttggacctgctggtg
tcatttaaaggcgtagcaagggcactgggcatggccatcaacgaacggcccgacctacga
ctgaccatctgccaggccatacgcacactcatcaccaaaagctgtaacaccgaagaggag
aaggtggaggtggggcgttttgctaagaacttcctgcctatcctgttcaacgtgttcagt
cagcagcctgctcctggagacattgccccctacaggatggctgtcctagacaccattaaa
gtctacctgactgtcacagacccacagatggtgtgtaccttcctgtcaaaagctacagaa
agactcagcagcccagacagcactgagttcatacggttgtcggtcatggacctgatggtt
gccatggcaccctgtgtagatgaggtcaccatgagtcagacctttgagctgattcggcca
tacctggagaataaggagccacacatgcagaagaaggcgtaccgcgtgttggaggagatg
tgcggtggagagagggaggagtgtagatctttcgttctctctcacctagagacgctcaaa
cacgttctgctggggacactaaagaatgcgtcctctccagccaagaggcccagactaaag
tgtctgatccacattgtgaagcagctgagtgaagaacacagagacttcatcactgccctg
ctaccagaggtgatcatatgtactaaagaggtgtcagtaggagctcgaaagaatgcctac
actctactggtggagataggaaacgcctttatccggttctgtggagatgccaaagaagcc
ttggagcagtacctactgttggtgtacgtggggctgaccggctctgtcacgatgatcacg
tgtacagtcctggctctcaccagactggtctttgagtacaaagactctatagacatggga
tcgatggagcacctcctacacaacgtgtgtctgctgctgacgtctcggaccagggagatt
gtcaaagcagcgctcagcttcatcaaggtcatcctcttcgtcatggaccccaagacgctg
gctggacacgccacagtgatgatggagggtgttgggaacatcaaggatgacgttagaaga
cacttcaggacgaagctgaaaaacattttcaccaagttcatcaggaagtttgggtttgag
ttggtgaaaagcaagctgcctgcggagcatcataaggtattggtgaacatccgtaaggct
gaggccagaaccaagagatcaagactggctgacgaagaccatgacgactcagacagcggg
gatgaaaagcctaaagccaggggagagagtattgaggagatcttggccgagtcagactct
gacatgtcagatgacgaaaggcctaagggcgctaagaaccagaagaagcccacaaagcag
aaggggcgggcctggctgaaggagggacagggagacgaaccactcaacttcctggatccc
actgtctcccagagggtcttggccaccaacccagacatgaagaagagggcaaaagttcag
cacggcttcaaggtcacgtcagacggaagactcatcatcagagaggacgatgacgaggga
gacaagactaaagatgatgagggagagatgaaagacattctggaggaggctggagtcaag
agtataaagactaagaagaggacattccagcatggtcactacgaggatgacatggagatc
gaaccccagctgaaatacaaagctggaggctcggggatccacagacctctgggtgggagc
agagacctggggggagactacaaggccaagaagggtaaaggagatgtgaagaggaaagga
aaggttgatccatatgcctacatccctctgaggaaagcacagctcaaccgcaggaagaaa
gcgaagatgcagggccagtttaagggcatggtgagaggggcccagaagggagcgcagtct
gggaagaggatgcaaaggaacaagcggagggcctga

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