Coregonus clupeaformis (lake whitefish): 121553225
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Entry
121553225 CDS
T08357
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121553225 (rrp12)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
90S particles
Other 90S particles
121553225 (rrp12)
Pre-60S particles
Other pre-60S particles
121553225 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
ARMC9_ARM
Katanin_con80
Motif
Other DBs
NCBI-GeneID:
121553225
NCBI-ProteinID:
XP_041722181
LinkDB
All DBs
Position
37:complement(4819840..4847823)
Genome browser
AA seq
1291 aa
AA seq
DB search
MVKSGKLKSGAASKLKRWKKGHSSDSNPQTSRFRQAARSRFFSRPSEKSDLTVDALKLHN
ELQAGTLERGAVGQGDACMEETAEHALSDRSAGTFLSGLSDCSNLTFRKVQRFWESNSAS
HKEICAVLAAVTDVIRSQGGKETETEYFAALMTTLEAVDSGESLAAVAYLLNLVMKRVPA
PVLMSKFSDTAKALMDVMSTLASSESASALRWILSCLSTLLRKQDVTVWSYPSTLQTYHG
LLSFTVHSKPKIRKAAQHGVCSILRGGDLLFTDNAPTHHPAAATAAKFCIKEIEQAGGSK
EDTTTLHVLGLLKDLMVTFPLNAVKSCCETLLRVMTLSHVLVTACAMQVFHKLFSGKPNP
ATLSAELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLASVQSSLSLGHLPRLFST
AMSCLLSPHTQVVSAATNTLKTLLSECVAPRMEEIGPVSPTASSGNPSYVCKMFRIVEEG
LSYRFHASWPFVLQVLGCFYRAAGKHTHPVMTKSLQSLADLRSTPRFPFCGELDLAVGGA
VESMGPEVLLTAVPLNITGLEDNLEFPRSWLIPVIRDHVKNTHLAYYTAYLLPLAATLRQ
RAEDLEKAGQKLEAKVYKTLQLQIWTMLPGFCVGPLDLLVSFKGVARALGMAINERPDLR
LTICQAIRTLITKSCNTEEEKVEVGRFAKNFLPILFNVFSQQPAPGDIAPYRMAVLDTIK
VYLTVTDPQMVCTFLSKATERLSSPDSTEFIRLSVMDLMVAMAPCVDEVTMSQTFELIRP
YLENKEPHMQKKAYRVLEEMCGGEREECRSFVLSHLETLKHVLLGTLKNASSPAKRPRLK
CLIHIVKQLSEEHRDFITALLPEVIICTKEVSVGARKNAYTLLVEIGNAFIRFCGDAKEA
LEQYLLLVYVGLTGSVTMITCTVLALTRLVFEYKDSIDMGSMEHLLHNVCLLLTSRTREI
VKAALSFIKVILFVMDPKTLAGHATVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSKLPAEHHKVLVNIRKAEARTKRSRLADEDHDDSDSGDEKPKARGESIEEILAESDS
DMSDDERPKGAKNQKKPTKQKGRAWLKEGQGDEPLNFLDPTVSQRVLATNPDMKKRAKVQ
HGFKVTSDGRLIIREDDDEGDKTKDDEGEMKDILEEAGVKSIKTKKRTFQHGHYEDDMEI
EPQLKYKAGGSGIHRPLGGSRDLGGDYKAKKGKGDVKRKGKVDPYAYIPLRKAQLNRRKK
AKMQGQFKGMVRGAQKGAQSGKRMQRNKRRA
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatctggaaaattaaaatctggggccgcatcgaaactgaagcgatggaaaaaa
ggacacagcagcgactcgaacccccagacgagccgattcagacaggctgccagaagccgt
ttcttcagccgcccctccgagaagagtgacctgacagtagatgcgctcaaactgcacaac
gagctgcaggcaggaaccctggagaggggtgcggttggccagggagatgcctgtatggag
gagacagcagagcatgccctttctgataggagcgcagggaccttcctcagcgggttgtca
gactgctcaaacctcaccttcagaaaggtgcagcgcttctgggagtccaactcagcttcc
cataaagagatttgtgcggtgctggctgcggtgactgatgtgattcgatctcagggaggg
aaggagactgaaacagagtactttgcagctctgatgaccaccctggaggcagtggattca
ggggagtctctggctgctgtagcctacctcctcaacctggttatgaaacgcgttccagca
ccagtgttgatgtctaagttctccgacacggccaaagctctgatggacgtcatgtccacc
ctggccagctcagaatccgcctccgcactcagatggatcctgtcgtgcctctccactctt
ttgaggaagcaggatgttacagtgtggagttacccgtctactctgcagacataccacggt
ctgctcagcttcactgtccacagcaagcccaagatccgtaaagcagcgcagcatggtgtt
tgttccatcctgagaggcggtgacttactgtttacagacaacgccccgacccaccacccg
gctgctgcaacagccgccaagttctgcatcaaagagatcgaacaggcaggaggcagtaag
gaggacaccaccaccctgcacgtcctgggcctcctgaaggacctcatggtcaccttccct
ctcaatgccgtcaagtcctgctgtgagactctgctcagggtgatgaccctcagccacgtg
ttggtgacagcatgtgccatgcaggtcttccataagctgttcagtgggaaacccaaccct
gctaccctgtctgctgaactcaacgctcagattatcacggccctgtatgactacctgccc
agtgagaatgacttgcagcctctactagcctggctggctgtcatggagaaagcccacgtt
cacctggccagtgttcagtcgtctctaagtctggggcatctccctcgtctcttctccacg
gccatgtcctgcctcctgtcacctcacacacaggtcgtctctgctgccaccaatacactc
aagactctgctgtcggagtgtgtggctcctcgcatggaggagatcggccctgtcagcccc
accgcttcctctggaaacccttcctacgtctgcaagatgttccgtatcgtggaggagggt
ctgtcgtatcgcttccacgcctcctggccgttcgttctgcaggtgctgggctgcttctac
agagcagcagggaaacacacacaccccgtcatgaccaagtctctccagtctctagcggac
ctgcgctccacccctcggttcccattctgtggtgagctggacctggcagtaggtggtgct
gtagagagcatgggacctgaagtactgctgaccgctgtaccactcaacatcactggactg
gaagacaatctggagttccctcgtagttggttgatccccgtcatacgtgatcacgttaag
aacacgcacctggcttactacacagcatatctcctgccgctcgctgccacgctccgacag
agagctgaggacctggagaaggctggacagaaactggaggcaaaagtctacaagactctc
cagctgcagatctggaccatgctgccagggttctgtgtgggtcccttggacctgctggtg
tcatttaaaggcgtagcaagggcactgggcatggccatcaacgaacggcccgacctacga
ctgaccatctgccaggccatacgcacactcatcaccaaaagctgtaacaccgaagaggag
aaggtggaggtggggcgttttgctaagaacttcctgcctatcctgttcaacgtgttcagt
cagcagcctgctcctggagacattgccccctacaggatggctgtcctagacaccattaaa
gtctacctgactgtcacagacccacagatggtgtgtaccttcctgtcaaaagctacagaa
agactcagcagcccagacagcactgagttcatacggttgtcggtcatggacctgatggtt
gccatggcaccctgtgtagatgaggtcaccatgagtcagacctttgagctgattcggcca
tacctggagaataaggagccacacatgcagaagaaggcgtaccgcgtgttggaggagatg
tgcggtggagagagggaggagtgtagatctttcgttctctctcacctagagacgctcaaa
cacgttctgctggggacactaaagaatgcgtcctctccagccaagaggcccagactaaag
tgtctgatccacattgtgaagcagctgagtgaagaacacagagacttcatcactgccctg
ctaccagaggtgatcatatgtactaaagaggtgtcagtaggagctcgaaagaatgcctac
actctactggtggagataggaaacgcctttatccggttctgtggagatgccaaagaagcc
ttggagcagtacctactgttggtgtacgtggggctgaccggctctgtcacgatgatcacg
tgtacagtcctggctctcaccagactggtctttgagtacaaagactctatagacatggga
tcgatggagcacctcctacacaacgtgtgtctgctgctgacgtctcggaccagggagatt
gtcaaagcagcgctcagcttcatcaaggtcatcctcttcgtcatggaccccaagacgctg
gctggacacgccacagtgatgatggagggtgttgggaacatcaaggatgacgttagaaga
cacttcaggacgaagctgaaaaacattttcaccaagttcatcaggaagtttgggtttgag
ttggtgaaaagcaagctgcctgcggagcatcataaggtattggtgaacatccgtaaggct
gaggccagaaccaagagatcaagactggctgacgaagaccatgacgactcagacagcggg
gatgaaaagcctaaagccaggggagagagtattgaggagatcttggccgagtcagactct
gacatgtcagatgacgaaaggcctaagggcgctaagaaccagaagaagcccacaaagcag
aaggggcgggcctggctgaaggagggacagggagacgaaccactcaacttcctggatccc
actgtctcccagagggtcttggccaccaacccagacatgaagaagagggcaaaagttcag
cacggcttcaaggtcacgtcagacggaagactcatcatcagagaggacgatgacgaggga
gacaagactaaagatgatgagggagagatgaaagacattctggaggaggctggagtcaag
agtataaagactaagaagaggacattccagcatggtcactacgaggatgacatggagatc
gaaccccagctgaaatacaaagctggaggctcggggatccacagacctctgggtgggagc
agagacctggggggagactacaaggccaagaagggtaaaggagatgtgaagaggaaagga
aaggttgatccatatgcctacatccctctgaggaaagcacagctcaaccgcaggaagaaa
gcgaagatgcagggccagtttaagggcatggtgagaggggcccagaagggagcgcagtct
gggaagaggatgcaaaggaacaagcggagggcctga
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