Coregonus clupeaformis (lake whitefish): 121553261 Help Entry 121553261         CDS       T08357                                  Symbol col17a1b Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cclu00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     121553261 (col17a1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  121553261 NCBI-ProteinID:  XP_041722216 LinkDB All DBs Position 37:complement(24437221..24460140) Genome browser AA seq 1613 aa AA seqDB search MDDLTTRKRNHSGGSSGGKVVTETTSRLVSLPPKGGSGSKSSTHKTMSSSAGGLWLEKNI LTQNSCGSNFSSSSVGVNAGGSSSSPGFYLGDYSEGGGDGGGGGGGGYGGVYGGSSGSKV KCSSSGGSRRAQNSASPGGLSPGFLERKSMASRSGGYDGSSSGNSSPEFTRKDYAGSGAT RIGRSQSRESEIRARLQSASPSAGRWTELDDVKRLVKGGRSNSVSPTRSSTSSTLPVPRK ATVETKIVTEASQSVSGQYETTTLDSGLPSSYSWTSSTLPISSATGSSSSSSSAYGYHSN TNNMSPGSGSSLLNTTSPSSLSVYGFQNNLAPTSSSVLTTSGVNAHSGTFTGYGVQKNIS NGGGLVSTGVSTSAMSALRSHTDDAYRKDLKYLVLQKENVPVKKDTEVLTLAKDSGKHFT SSVRSVGGSLSGDSLKKEKMVTSYSETAPVLLKSESNSYYGSPLVSTKDKATYAEIQKEG DYYSSRGRGGGCCGCVDSCCSWWKWLLGLLLLSLLLLGLLFGLIALAEEVRNLKSRVAAL ESESTSTAARTSRLSVSANDIHNLESGTYMDTGGAARSDNTLNLDTSLGMGMGTGMGTGT DNAALQRTIQQLLRAEMQSQSFRALLPSSMKGDRGEPGPKGDAGNHGTKGDNGFPGLPGP PGAIGHSGHEGPKGQKGSQGDHGAEGPQGLRGREGPGGPRGEPGPSGFGEKGDKGSPGES GSLGPVGPVGQAGPKGSGGAPGTPGMPGQPGSQGFRGESGPPGPKGDHGEKGPRGAAGDP GLSGLPGPAGEKGPKGSAGAPGIDGDKGQRGDQGPTGLPGIRGPSGPAGDSGLPGIPGLQ GPPGIPGNPGQPGAKGEAGQPGRVINAGGSSSVAIPGPPGSPGPPGQAGPPGLSGPIGPA GLPGQSGPKGERGAKGEMGVQGLQGEAGISMKTSETVSSSRAERQFSAAALPGPPGPPGP PGAPGHAGDSRPGLPGPAGPPGEPGYGRPGPRGEKGEPGSFVPNSGTFFSGPPGPPGPSG PKGSPGTPGPRGYQGDSGQPGLPGSPGRPGGGSERASSYGGTQGPPGPPGTPGIPGPEGH KGEPGLPGSPGLPGSARGTVAASPGFPGPPGPPGPPGHPGIPGIASAPPDLRQYVNDYLR INARSMSAGLPGPRGLPGPPGVPGSSGSFGSVEDISSRVIAYLQRSGSGFSGGAQGPPGP PGPPGASGSGSGSMSVNDLIVLLQRDDVRRYVMGPPGPPGPAGPDARGGSMANYNPQEVA TYVFRLMNERGIGGGQPGPPGAPGPPGLPGSSNGVGDISTLLQNSQFRAMVGRSAGAPGP PGTPGIPGPPGPPGTPGGSSYRSSASGGLRIEDVQHYLQSSGFSGPPGPPGPPGPQGPPG NSHGVVSYGDSRNIGNYQRETIRTELQAYLSSDSIRHSFIGPPGTPGSQGPRGHKGDPGE PGGVQTNRQSYAQSDPRYSSDLERRQSDIERLTETLDYSNVALRVTDYIKNQGLLQDFLP EGRQRGGSWETQGLPGPPGPPGPPGYSRVIGSYGNVTADLMDFFRTHGTIVGPPGNTGPK GDRGYIGPKGDRGEMGRPGPPGLQGLRGQDGYRGEKGEKGEVRVGRRRRSIGV NT seq 4842 nt NT seq  +upstreamnt  +downstreamnt atggatgatttaacaacaagaaagagaaaccactcaggaggaagctctgggggaaaggtt gtgacagaaactacaagtagattggtatctttacctccaaagggtggcagtggatcaaaa agtagtacccacaagactatgtccagcagtgctggaggcctgtggttggaaaagaacatt ttaacccagaacagctgcggaagtaacttttcctcatcttctgtgggtgtcaatgccgga ggatccagctcctcaccagggttctacctgggggactactctgagggtggtggagatggt ggagggggaggtggtggaggctatggaggagtgtacggaggaagctccgggtcaaaggtg aagtgcagctcgtcagggggctccaggagggcccagaactcggcctcgcctgggggtcta tcccctggcttcctggaaaggaagagtatggccagtcgctcaggaggctacgacggaagc tctagtggcaactcctcccctgagtttacacggaaagactatgcagggtcaggtgccact agaatagggaggagccagagtagagagagtgaaatcagagccagactgcagagtgcctct cccagtgctggcagatggactgagctggatgatgtgaagaggctggtgaagggaggacgc tccaacagtgtcagccccacccgctcctccacttcctccactctgcctgtccccaggaag gccaccgtcgagaccaagatcgtcactgaggcctcccagtcagtctctgggcagtatgag accactaccctggactctggcctaccttcttcctactcctggactagctccacactgccc atctcctccgccaccggcagcagcagcagcagcagcagcgcctacggttaccatagcaac accaacaacatgtctccaggctcggggtcctctctgctcaataccacctcaccctcctcc ctgtcagtgtatggattccagaataacttggcgcccacgtcaagtagtgtcctcaccacc agtggagttaatgcacattcaggcacttttacaggatatggagtgcagaagaacatatcg aatgggggtggtctcgtcagcacaggagtgtcaacctctgcaatgtccgctttgaggtct cacactgatgacgcatacaggaaagacttaaagtaccttgtgctgcagaaggagaatgtt ccagtcaagaaagatactgaagtgctcaccctggctaaagacagtggaaaacacttcact agcagtgttcgcagtgttgggggttcactatctggtgattctctgaagaaggagaagatg gtgaccagctatagtgagactgcaccagtccttctgaaatctgagtccaattcatactat ggatcacccctagtgtcaacaaaagacaaagcaacatatgcagagatccagaaagagggg gactactacagcagcagaggacgaggtgggggctgctgtgggtgtgtggactcctgctgt tcctggtggaagtggctgctaggactgctcttgctctccctgctgctcctgggcctgctc ttcggactcattgccctggcggaggaagtgaggaatctgaagtctcgagtggcagctctg gagtctgagtctacctccaccgctgctcgcaccagccggctgtcagtctccgctaacgac atccacaacctcgagtctggcacctacatggacactgggggcgcggcccgctccgacaac accctgaacctggataccagcctgggcatggggatgggcactggcatgggaactggcaca gacaatgctgccctccagaggaccatccagcaactactgagggctgagatgcagtctcag tcatttagagcccttcttccctcgtcaatgaaaggggacagaggagagccgggacctaaa ggcgatgcagggaatcatggaactaaaggtgacaatggtttcccaggactgccaggtcct ccaggtgccattggtcactcaggacacgaaggacccaaaggacaaaaaggaagtcaaggt gaccatggagctgaggggccacaagggctcaggggccgagaggggcctggagggcccaga ggggagccaggaccttcagggtttggagagaagggggataaaggttctcctggtgaatca ggatctcttggtcctgttggtccagtcggccaagctgggcccaaaggctcagggggtgct ccggggactcctggtatgccaggccaaccaggttctcaaggcttccgtggagaatcagga ccacctggaccgaagggtgaccatggtgagaaaggacctcggggggcagcaggtgaccca ggactatcaggcttgccaggtccagccggagagaaaggacccaaaggatctgcaggagct cctggaattgatggtgacaaaggccaaagaggtgatcagggtcctactgggttaccaggg atcagaggtccatctgggcctgcaggagactcaggcctaccaggaataccagggcttcaa gggccaccaggaataccagggaaccctggacaaccaggagccaagggtgaggcaggacaa ccaggaagagtcatcaatgcagggggatccagttctgtggccatccccggccccccagga agccccggtccccccggccaagccggacccccagggttatcaggccccattggccctgct ggtcttcctggtcagtctggtcctaaaggtgagagaggggcgaagggtgagatgggtgtt cagggactccagggagaggcaggtatctcaatgaaaaccagtgaaaccgtcagctcatcc agagctgagagacagttcagtgctgctgcactaccaggtccccctggtccccctggaccc cctggagcccctggacatgcaggtgactcaagaccaggactcccaggaccagctggtccc ccaggagagccaggatatggcagacctggtcctagaggagagaaaggagagccaggaagc tttgtacccaattcaggaacgttcttctctggaccccctggacctcccgggccatctggg ccaaaaggatcacctggtacaccaggaccaagaggataccaaggagattcaggccagcct ggtctaccagggagcccaggaagaccaggaggaggctctgaaagagcgtcatcatacggt ggaacacaggggccacctggacccccagggactccagggattcctggaccagagggacac aaaggtgaacctggacttcccggttctcctggtcttcctggctctgcaagaggcactgtg gcggccagcccagggttcccaggtcctcctggtccaccgggtcctcccggacacccaggc attccaggcatagcctccgctcctcctgatctgcgtcagtatgtcaacgactatctccga attaatgctaggagtatgtccgctggtcttcccggcccccgtggcctccctggaccccca ggagttcctggatcctctggatcctttggttctgtggaggacatatcctctcgtgtcatc gcctatctgcagcgttcaggatcaggcttcagcggtggtgctcagggtcctccaggcccc ccaggacctcctggggcctctggctctggttctggctcaatgtctgtcaacgacctcatt gtcctgctacagagggatgacgtacggcgatacgtaatgggcccacccggacctccaggc ccagcaggaccagacgccagaggaggcagtatggcaaactacaacccacaggaagtggcc acctacgtcttcagactcatgaacgagcgcgggatcggtggtgggcagcctggacctccg ggtgcacccgggcctccagggttacctggctcctccaacggtgttggtgacatctccaca ctcctgcaaaattcacaatttcgtgcgatggttgggcgctctgctggagcccctggtcct cctggtactccaggaatcccaggacccccaggcccccctggtaccccaggaggatcatct tacaggagctcagcctcagggggtttaaggatagaggacgtccagcattacctccaaagt tctgggttcagtggtcctccaggcccacccggccccccaggacctcaggggcccccaggg aactctcacggagtagtctcctatggagatagtagaaacattggaaactaccagcgagaa accatccgcacagaactccaggcgtacctcagcagtgacagcatacggcactccttcatt ggcccaccaggtactcctgggtctcagggtccccgtggtcacaaaggagaccctggagaa cctggtggggttcagactaaccgtcagagttatgcccagagtgacccacggtactcttct gaccttgagcggcgccagagtgacattgagaggttgacagaaacactggactactccaac gttgccttgagagtgacagactacatcaagaaccagggcttactgcaggacttcctgcct gagggtcgccagcgaggaggctcctgggagacccaaggcctcccaggaccccctgggcct cctggaccccccgggtatagccgtgtcattgggtcttacggcaacgtgactgctgacctc atggacttctttagaacccacggcaccattgttggccccccagggaatactggaccgaaa ggagacagggggtacatcggacccaaaggagacagaggcgagatgggtcgcccaggccct cccggactgcaggggttacgtggtcaggatggatacagaggagagaagggagagaaaggt gaagttagggttggtcgtcgacgtcggagcattggcgtttaa

DBGET integrated database retrieval system