Coregonus clupeaformis (lake whitefish): 121553273
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Entry
121553273 CDS
T08357
Symbol
rin2a
Name
(RefSeq) ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121553273 (rin2a)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121553273 (rin2a)
BRITE hierarchy
Motif
Pfam:
VPS9
RA
SH2
RelB
Motif
Other DBs
NCBI-GeneID:
121553273
NCBI-ProteinID:
XP_045067533
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All DBs
Position
37:27656720..27734793
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AA seq
1121 aa
AA seq
DB search
MSTSALIQPSLREKKGSFFKLIDSFAWEIGTLKREMVQKAEPAERDPEPVILQGLDGEVG
GLFLQARPCVGVGARLAGARDSGYDSLCRRMSVLDRLVQTHVVWLQLGLSHADSTSMLEP
QPTGTFLVRKSTTLQRKVISLRMHQDSETPVKDFPVKESQYTFSLEGSGLSFADLFRLVA
FCCISRDVLPFTLKLPEAISAAKTLTDLEEVAKLGAGFWDSGRCCRRKSSVSRLSGTTTQ
DQSPSPLVTRTPSQLECSQSNGALCFINPLFLKVHDPEGGNHTPPSSTSHYNNPHHLNNN
STTTTTATTVQVQQHCTSNPEQLNDCTNSPQPLSESPQNLSPDNSPQHHNNSVSQAKSMS
RPPPPRPPPPHCAPRRPAPPQRQRSMPEKISWINPLKEKERVGEREKGGEREKGSSLLSR
LGSSLSISPSSPLLLSSPPKKLSISAPISIPLPLSSSPSRPKPTPPSDVDCHLALDDQTI
ENAISLSLAKLSLRNTTTTPDDNTEGNSPSTQDPAPSCREEEGGSGRGGREGGGREGGGR
GGREGGGREGGGREGGGRGDSVQRLSDMSLSTESSADSLDFSQGFFPPLPEPSPPTTNNL
VLPPLTHPYSSMEEDNDDDDEDEADFGGSLESDHDQDQDLTITPPGLRTKRRASAGAMVI
QRALRGHLRKMSGVFNSLMTPEKRAIRRVLELSRDKGSYFGCLVQDYLSFLQEGGGSHAW
QCHASGLELLQTLRQFITQMKSYLRQSSELEPPIESLIPEDQIDYVLEKAMHKIVLKPLK
GVVGVALQEFQVRSGAWQELKENLSLAKVRQPQEMGVTDALPPDPVAIEKIRHKFYTMCK
LYSPEKKVTMLLHVCKLIYTIMEDNSGRLYGADDFLPMLTYVLAQCDMPQLDNEILYMME
LLDPSLLHGEGGYYLTSAYGAMSLIRNFQEEQAARVLSSETRNTLHQWHCRRTTQRTAPS
VDDFQNYLRVALQELDSGCTAKTLQVQPYATTEEVCQICAYKFKVLDPENYALFLLTEGS
SQQLAPDTHPQKIKAELHSRPQAAPFHFVFRRVANLNDLTVTSLDPQSNLNDVTLTTDSE
PNLNDLALTPSDPQPNFNLGLSPSLSLSLPPNQHNGNSISI
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaagcgcactcatccaacccagcctgagggagaagaaagggagcttcttcaag
ctgatcgactcgtttgcctgggagatcgggactctgaagagggagatggtgcagaaggct
gagccagcagagagagacccagagcctgtcatactacaggggctggatggggaggtggga
ggtctgttcctacaggctcgtccctgtgttggtgtgggggctcggctggctggagctagg
gattccggctacgactctttgtgtagaaggatgagtgtgctggacaggctggtgcagacg
cacgttgtgtggctgcagctgggacttagccatgcagactccacaagcatgctggaaccg
cagcccaccgggacgtttctggtgaggaagtcgactaccctgcagaggaaggtgatctct
ctgcgtatgcatcaggattctgagacacccgtcaaagacttccctgtgaaggagagtcaa
tacacattctccttggagggatcgggcctcagcttcgcagacctgttccgtcttgtggcc
ttctgctgcatcagcagggatgtcttgccattcactctaaagcttcctgaagccatctct
gcagccaagacactaacagacttggaggaggtggccaagctaggagcaggcttctgggac
tctgggcgttgctgcaggaggaagagttctgtctcccggttgtccggaacaaccacccag
gaccaatcacccagccccctggtcacccgcaccccatcccagcttgagtgttcccagtcc
aatggggctctctgcttcatcaaccccctcttcctgaaggttcacgacccagaggggggc
aaccacacccctccgtcctccaccagccactacaacaacccccaccacctaaacaacaat
agtactacaacaactacagcaacaacggtacaagtacaacagcactgtaccagcaaccca
gagcaacttaacgactgcacaaacagccctcaaccccttagcgagagccctcagaatctt
agccctgacaacagcccccagcatcataacaacagtgtgagccaggctaagagcatgtcc
cgccccccacctcctcgccccccacctccccactgtgccccccgtcgccctgccccccct
caacgccagcgcagcatgcctgagaagatatcctggatcaaccccctgaaagagaaggag
agggtgggagagagggagaaaggaggagagagggagaagggcagtagccttctctcccgc
ctgggctcctctctcagcatcagcccttcctctcctttgctcttatcctcccctcctaag
aagctcagcatcagtgcccccatctctatccccctccccctctcctcctccccaagtagg
ccaaaacccacgccaccaagcgacgttgactgccatcttgctctcgatgaccagactatt
gagaacgccatttctctcagtctggctaagctgtcactgagaaacaccaccaccacccct
gatgacaacacagagggaaacagtccgtccactcaagacccagccccctcctgtcgagag
gaagaaggaggaagtggaagaggaggaagagaaggaggaggaagagaaggaggaggaaga
ggaggaagagaaggaggaggaagagaaggaggaggaagagaaggaggaggaagaggggac
agtgtgcagcgtctgagcgacatgagcctttccaccgaatcctctgccgactcactagac
ttttcccagggcttcttcccccctctccctgaacccagcccccccaccaccaacaacctg
gtcctgccccccctcacccacccctacagcagcatggaggaagacaacgatgacgatgat
gaagacgaagcagacttcggcgggagcctggagagcgaccatgaccaagaccaggacctg
accatcacccctcccgggctgcgcaccaaacggcgagccagcgccggggccatggtcatc
cagcgggccctcaggggccacctccgtaagatgagtggggtgttcaactctctgatgacc
ccagagaaacgggccatacggagagtcctggagctgtccagggataagggctcgtacttc
ggctgcctggtgcaggactacctgagcttcctgcaggagggagggggcagccatgcctgg
cagtgccacgcgtcaggactggagttgctgcagacgctacgccagttcatcacccagatg
aagagctacctgcggcagagctctgagctagagccccccatcgagtcactcatcccagag
gaccagatcgactatgtcctagagaaggccatgcataagattgtcctgaagcccctgaaa
ggtgtggtgggggtggccctccaggagttccaggtccgcagcggggcgtggcaggagctt
aaggagaacctctcattggccaaggtccggcagccacaggaaatgggcgtgaccgacgca
ctccctccggatccagttgccatagagaagatccggcacaagttttacaccatgtgtaaa
ctctactcccctgagaagaaggtgaccatgctgctgcacgtgtgtaaactcatctatacc
atcatggaggacaactcaggacgtctgtacggggcagatgacttcctgcccatgcttacc
tatgtgttggcccagtgtgacatgcctcaactagacaacgagatcctctacatgatggag
ctgctggacccctctctgctccatggagaaggtgggtactacctgaccagtgcatacgga
gccatgtccctcatcaggaacttccaagaggagcaagcagctcgtgtactcagttctgaa
acacgcaacacactccaccagtggcactgtcgccgcaccacccaacgcactgctccctcc
gtagatgacttccagaactacctgcgagtggcgctccaagagctggacagcggctgcacg
gccaaaaccctgcaggtgcagccctacgccaccaccgaggaagtctgccagatctgcgcc
tacaaattcaaagttctcgaccctgagaattacgctctgttcctgctcactgagggctcg
agccagcagctagcccctgacacacacccccagaagatcaaagctgagctccacagtcga
ccccaggccgcaccttttcacttcgtcttccgtcgcgtggctaacctcaatgacctgacc
gtgacctctcttgacccccagtccaacctcaatgacgtcacccttaccacggactctgag
cccaatcttaatgatttagccttaaccccttcggacccccagcccaacttcaacctgggt
ctcagtcccagtctcagcctcagtctaccccccaaccagcacaatggcaactccatatct
atctga
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