Coregonus clupeaformis (lake whitefish): 121553329
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Entry
121553329 CDS
T08357
Name
(RefSeq) sodium/calcium exchanger 1 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121553329
04020 Calcium signaling pathway
121553329
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121553329
04261 Adrenergic signaling in cardiomyocytes
121553329
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121553329
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121553329
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
121553329
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Others
121553329
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Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
Motif
Other DBs
NCBI-GeneID:
121553329
NCBI-ProteinID:
XP_041722292
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Position
37
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AA seq
952 aa
AA seq
DB search
MGHFQLSPMLSLGLRLVVVVAILFLKFQHVTAMSSDVDLDHFVSPTASGNVTVCTTAGTA
CEKGVILPIWEPQNPSFGDKVARATVYFVALVYMFLGVSIIADRFMASIEVITSQEKEIT
IKRPNGETTTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHGFDAGTLGPSTIVGS
AAFNMFVIIGICVYVVPDGEVRKVKHLRVFFVTATWSIFAYIWLYLILAVISPGIVQVWE
GLLTLFFFPICVLFAWVADRRLLFYKYVYKRYRTGKQRGMIIETEGDRPLPSKVDIEMDG
KMLNSHAADFLDGPLGLELNVKDLDEEETRRDMAKILKELKQKHPDKEMEQLIELANYQV
LSSQQKSRAFYRCQATRLMTGAGNILKKHAADQARKAVSLHEVRSDVADNDPVSKIYFDP
GSYQCLENCGTVAVNVLRRGGDLTKTVSVEFRTEDGSANAGSDYEFTEGVVVFKPGETQK
EIRVGIIDDDIFEEDENFLIHLSNVKVLLAEGEEVENPETNHVEAVACLGLPATATVTIF
DDDHAGIFTFEEPVAHVSESVGTMEVKVLRTSGARGVVMVPYKTVEGTARGGGEDFEDTQ
GVLEFQNDEIFKMIKVRIVDDEEYEKNKTFYVEIGEPRLMETNDSKGGGDSPATEVAVKE
VEEETPLTAVDDEDQRIADMGRPTLGDHVKLEIIIEESYEFKNTVDKLIKKTNLALLVGT
NSWRDQFIEAITVSAGEDDEDEECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGW
ACFVVSICMIGLLTAFIGDLASHFGCTVGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQ
YADASIGNVTGSNAVNVFLGIGVAWSIAAIYHNSKGNDFKVDPGSLAFSVTLFTIFAFIC
VGVLMYRRRPSIGGELGGPRTPKVLTTMLFVSLWLLYILFSSLEVYCHFNAF
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgggacactttcagctctcccccatgctctcccttggccttcggcttgtggttgtcgta
gcaatcctgtttctcaaattccaacatgtgacggctatgtcctcggacgtggacttggat
cattttgtgtctccaactgccagcggcaacgttactgtgtgcaccacagcaggcacagca
tgcgaaaaaggggtaattctgcctatctgggaacctcagaatccctcgtttggggacaaa
gtggcacgggcgacagtctacttcgtggccctggtgtacatgttccttggagtgtccatc
atcgctgaccgtttcatggcgtccattgaggtcatcacctctcaggagaaagagatcacc
atcaagagacccaatggagagaccaccaccaccaccgtgcggatctggaacgagacagtg
tccaacctcacgctcatggccctgggttctagtgcccctgagatcctactgtccgtcatt
gaggtttgcggccatggttttgatgcgggaaccttgggtcctagcaccatcgtgggcagc
gccgccttcaacatgtttgtcatcatcggcatctgtgtgtacgtagtgccggacggggag
gtccgtaaggtcaagcacctgcgcgtcttcttcgtcacagccacctggagcatctttgcc
tacatctggctctacctgatcctggctgtcatctcccctggcatagtgcaggtgtgggag
ggcctgctcaccctcttcttcttccccatctgcgtgttgttcgcctgggtcgctgaccga
cgcctgctcttctacaagtacgtctacaagcgctaccgtactggcaagcagcgaggcatg
atcattgagacggagggcgaccgcccgctcccatccaaagttgacattgagatggacgga
aagatgctaaactctcatgcagcggacttcctggatgggcctctggggctggagctgaac
gtgaaggacctggatgaggaggagacccgccgcgacatggccaagatcctcaaggagctg
aagcagaagcacccagacaaggagatggagcagctgattgaactggccaactaccaggtg
ttgagttcgcagcagaagagcagggccttctaccgctgccaggccaccaggctcatgacc
ggcgctgggaacatcctgaagaagcatgcggctgaccaggcccgcaaggccgtcagcttg
cacgaggttcgctccgatgtggccgataacgaccccgtttccaagatctacttcgacccc
ggctcctaccagtgcctggagaactgtggcacagtggcagttaacgtgctacggcgaggc
ggtgacctgaccaagacggtgtcggtggagttccgtacagaggatggatcagccaatgcg
ggctcggactacgagttcaccgagggggtggtggtgttcaagcctggcgagacacagaag
gagatccgcgtgggcatcatcgatgatgacatctttgaggaggacgagaacttcctgatc
cacctgagcaacgtcaaagtgctgctggcagagggggaggaggtagagaacccagagacc
aatcacgtggaggcggtggcctgtctcggcctgcccgccacggcaactgtgaccatcttt
gacgacgaccacgccggcatcttcacgtttgaggagcctgtggcacacgtgagtgagagt
gtgggcaccatggaggtgaaggtgcttcgtacgtcgggggcacgtggggtcgtgatggtg
ccctacaagactgtggagggcacggcacgcggaggaggagaggactttgaagatacccaa
ggggtcctggagttccagaacgatgaaatctttaaaatgataaaggtaagaatcgttgac
gacgaggagtatgagaaaaacaagaccttctacgtggagattggagagcctcgcctgatg
gagaccaatgacagtaaaggtgggggagatagtcctgctacagaggtggctgtgaaggag
gtggaagaggagacgccactgaccgcagtggatgatgaggaccaacgcatcgctgatatg
ggccgacccacactgggggatcacgtcaaacttgaaatcatcattgaggaatcctacgag
tttaagaacactgtggacaagctgattaagaagactaacctggccctgctggtggggact
aacagctggagagaccagttcatcgaggccatcaccgtcagcgccggtgaggatgacgag
gatgaagaatgcggcgaggagaagctgccgtcctgcttcgactacgtcatgcacttcctc
accgtcttctggaaggttctgtttgcgttcgtgcccccgacagactactggaacggctgg
gcctgcttcgtggtgtccatctgtatgatcggcctgctcacagccttcatcggggacctg
gcctcccacttcggctgcaccgtgggcctcaaggactctgtcaccgccgtggtgttcgtg
gccctggggacctctgtgccagacacctttgccagtaaggtggcagccatccaggaccag
tatgctgacgcatccatcggcaacgtgacgggcagcaacgcggtcaatgtgttcctgggc
atcggcgtggcctggtccatcgctgccatctaccacaactccaagggcaacgacttcaag
gtagacccggggagcctggccttctccgtcaccctcttcaccatcttcgcgttcatctgc
gtgggggtgctgatgtaccggcggcggccttcgattggtggcgagctgggaggtccgcgg
actcccaaggtactgaccaccatgctgtttgtcagcctgtggctgctgtacattctgttc
tcctcgctggaggtctactgccacttcaatgccttctaa
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