Coregonus clupeaformis (lake whitefish): 121553332
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Entry
121553332 CDS
T08357
Name
(RefSeq) prominin-1-A
KO
K06532
prominin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121553332
04090 CD molecules [BR:
cclu04090
]
121553332
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121553332
CD molecules [BR:
cclu04090
]
Proteins
121553332
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
CorA
AgI_II_C2
DUF948
TctB
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
121553332
NCBI-ProteinID:
XP_041722298
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All DBs
Position
37:5189037..5216551
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AA seq
831 aa
AA seq
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MGACRRVWRLGGCVGPVLAWIGALFLGSSLAQPPPASCPTGVPPSNLSQPQYQSIPGADT
GFMSAVVQSFLHTVQPNPFPKDLLVNLLEGNGNIYDDKTTIKEVLLYEVGFLVCAAIGIV
YIILMPLVGFCLACCRCCGHCGGRMYQRQTKAVHCHRRGYYWATLLTTLVILSGNICMFF
SNQFLKVSVEDSSIEVNKTLDNLQTYLTAVPQQIDSVLIESNKTVDEVTRSLNNIGPLLG
REIQRSLEGPLNLALQSVSDMANVVNSTSILLVRLDSTLTHFQSDVAVVQANVSSVRDRI
NSTLRNPNCAECSADQSELQKLTFDTVTIPSLSELQSAVDNVTKADLNSKVKEGEDFFAS
IPQKVTNDTKDVVQNVMQQLEDIKRQIFEVKGNIPVSTLSNISDTLGEAQRYISMYSPQA
ERVEMIRWAVGIILSCVVLLVVVCNLLGLFLGPVGLSPKDVPTERSSTADCGGTFLMAGA
GISFLFSWLLMLVVLLLFILGGNVYTLVCQPWRSGQLLQFADTAGLIHGFNLGKTLGLKS
NLTLTEVYNECEQNRPLWTTLHLYELIDLNDLLNVSKYTEEIQQHFDSNEIKLSTITLLT
HEIRKQLHSFSAIAHDVDFSSVRQQINNIASINLNETADRLDKLAAIQPDRGIQLELTQE
TTVLREIQLYMNTTIIPQLTQLNSTIDALSVIASHINRTLGDVLSKVGTAQDFLNTNTSQ
IVKAESKEFLDCQMGYFMAYADWANLTITQQVGLCGPVAKAVDSAEVIVCSNMVQSLNAF
WFSLGWCMIFFVPSIIFSINLAKFYRRMKHSDVYDNHIAMNTIPRAQVKPY
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatgtaggagagtttggaggttggggggctgcgtcggccctgtgttggcctgg
atcggtgcactgttcctgggttccagcttggcccagcctccccctgcctcctgtcctacg
ggagtccctccctcgaacctgagccagccccagtaccagtcaatcccaggagcagacaca
ggcttcatgtccgctgtggtccagtccttcctccacaccgtccagcccaaccccttcccc
aaagatttgctggttaatttattggagggaaatggtaatatatacgatgacaaaacgacc
attaaagaggtccttctctatgaagttggattcctagtgtgtgctgctatagggattgta
tacattatcctgatgcccctggttgggttctgcctggcctgctgtcgctgctgtggacac
tgtggaggacgcatgtaccagagacagactaaagctgtccactgtcacaggagaggatac
tactgggctacactactcaccacgctagtcatactttcagggaacatctgcatgttcttc
agcaaccagtttttgaaagttagtgtcgaggacagctctatagaagtcaacaaaacactg
gacaacctccaaacctacctcacagctgtcccacagcaaattgacagtgtgctgatagag
agtaataagacagtggatgaagtcaccagaagcctcaataatataggtcctctgctgggc
agggagatccagagaagtctagagggccccctgaaccttgccctgcagtctgtcagcgat
atggccaatgtggtgaacagtaccagtatcctgctggtgaggttagactctactctaacc
cacttccagtctgatgtggctgtggtccaggctaacgttagctctgtcagagaccgcatc
aacagcacactgagaaaccctaactgtgctgagtgctctgccgatcagtcagagctacag
aaactaacatttgacactgtcactatccccagtctgagtgagctgcagtcggctgtcgat
aacgtcaccaaggctgatctcaactctaaagtgaaagagggagaagacttctttgccagt
attccccaaaaagtgaccaacgacaccaaggacgtggtacagaatgtgatgcagcagctt
gaagacatcaagagacagatctttgaggtgaagggaaacatccctgtctctaccctcagc
aacatctcagacacactgggagaggctcagagatacatcagcatgtactcaccacaggca
gagagggtagagatgatcaggtgggctgtaggtattatcctgagctgtgtagttctcctg
gttgtagtgtgtaacctcctgggtctgtttttgggtccggtgggactgagccctaaagac
gtcccaacagaacgatccagcaccgcagactgtggaggaaccttcctcatggcgggtgca
gggataagtttcctgttttcctggctcctcatgctggtggtgttactactatttatactg
ggagggaatgtctacacactggtgtgccagccctggcgcagtggacagctactacagttt
gctgacactgcgggcctgatacatggcttcaatttaggaaagacactgggcctgaagagc
aacctgactcttactgaagtatacaatgaatgtgaacagaacaggcctctatggacaaca
ctccatctgtatgagctcatagacctcaatgatttgctcaacgtgtccaaatacacagaa
gagattcagcagcactttgacagtaatgagatcaaactgtctaccatcaccctgctcacc
catgagatacgcaaacagctacacagcttctctgccatagcccatgatgtcgacttcagc
tctgtcagacagcagatcaacaatattgccagcattaatctgaatgaaacagcagacagg
ttagacaaacttgctgctattcaacctgatcgaggtattcaattagagctgacccaggag
actacagtcctgagagagatccagttatacatgaacactaccatcatcccacaactgact
cagttgaactccaccatagatgcccttagtgtcatagcatcacatatcaatcgcacatta
ggagatgtgttgagtaaagtgggaacagctcaagacttcctcaacactaacacttcacag
atagtcaaggctgagagtaaggagttcctggactgtcagatggggtacttcatggcgtat
gctgactgggctaacctcacaatcactcaacaggttggtctctgtggcccagtggcaaaa
gctgtggactcagctgaggttatagtctgctcaaacatggtgcaatctctgaatgcattc
tggttcagtctgggctggtgtatgatcttctttgtccccagcatcatcttctccatcaat
ctggccaaattctacaggaggatgaagcatagtgatgtctatgacaaccacatagccatg
aacaccatcccccgagcccaagtcaaaccctactga
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