Coregonus clupeaformis (lake whitefish): 121553360
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Entry
121553360 CDS
T08357
Name
(RefSeq) red-sensitive opsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121553360
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Vision
Opsin
121553360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
121553360
NCBI-ProteinID:
XP_041722344
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MAELGVFAARRQEETTRESGFSYTNSNNTKDPFEGPNYHIAPRWVYNISTLWMLFVVVAS
VFTNGLVLVATAKFKKLQHPLNWILVNLAFADIAETLLASTISVCNQMFGYFILGHPMCV
FEGYTVATCGIAGLWSLAVISWERWVVVCKPFGNVKFDAKWAMGGIIFSWVWSAFWCAPP
IFGWSRYWPHGLKTSCGPDVFGGNEDPGVLSYMITLMITCCFLPLAVIIFCYMFVWLAIR
AVAAQQKDSESTQKAEKEVSRMVVVMIFAYCVCWGPYTTFACFAAANPGYAFHPLAAALP
AYFAKSATIWNPVIYVFMNKQFRTCIMQLFGKAEDDGSEVSTSKTEVSTVAPA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctaggagtgtttgctgcaaggcgacaagaggaaacgacgcgagaatccgga
ttttcctacaccaacagcaacaacaccaaagatccttttgagggccccaactaccacatt
gctccaagatgggtgtacaatatctcgacactttggatgctctttgtggtcgttgcctca
gtcttcaccaatggcctggtactggtggccaccgctaaattcaagaagctccaacacccg
ctcaactggatcttggtcaaccttgctttcgcagacattgcggagacacttttggctagc
accatcagcgtttgcaaccagatgtttggctacttcattcttggacacccaatgtgcgtc
tttgagggatacactgtcgccacttgcggtattgctggtctgtggtctctagctgtcatc
tcctgggagagatgggtggtggtgtgcaagccctttggaaatgtcaagtttgatgccaaa
tgggccatgggaggtattatcttctcctgggtctggtctgctttctggtgtgccccgccc
atctttggctggagcaggtactggcctcatggcctgaagacttcctgtggacctgatgtg
ttcggaggtaatgaggaccctggagtcctgtcatacatgattactctcatgattacatgc
tgcttcctgcccctggcagtgatcatcttctgctacatgttcgtgtggctggccatccgt
gctgttgccgcgcagcagaaagactctgagtcaacacagaaggctgagaaggaagtgtcc
aggatggtcgttgtcatgatttttgcttactgtgtatgctggggaccttatacaaccttt
gcctgctttgctgcggctaaccctgggtatgctttccaccctctggctgccgctctgcct
gcctactttgccaaaagcgccaccatctggaatccggttatctatgtcttcatgaacaaa
cagttccgtacgtgcatcatgcagctctttggcaaggcggaagacgatggctcggaagtg
tctacatcaaaaacagaggtttccaccgtggcacctgcataa
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