Coregonus clupeaformis (lake whitefish): 121553386
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Entry
121553386 CDS
T08357
Name
(RefSeq) RPE-retinal G protein-coupled receptor
KO
K04254
retinal G protein coupled receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121553386
04030 G protein-coupled receptors [BR:
cclu04030
]
121553386
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121553386
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Vision
Opsin
121553386
BRITE hierarchy
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
ECF_trnsprt
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121553386
NCBI-ProteinID:
XP_041722388
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All DBs
Position
37:435799..455926
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AA seq
295 aa
AA seq
DB search
MVSSYPLPDGFSDIDVFSLGSCLLVEGLLGFFLNAVTVAAFIKIRELRTPSNFLVFSLAL
ADMGISANATIAAFSSFLRYWPYGSDGCQTHGFQGFVTALASIHFIAAIAWDRYHQYCTR
TKLQWSSAITLTIFIWLFTAFWSAMPLIGWGEYDYEPLRTCCTLDYSKGDRNYVSYLIPM
AIFNMAVQTFVVMSSYNSIGQKFKKTGNPRFNTATPLKTFLFCWGPYGVLTFYAAVKNAN
LVSPKIRMLAPILAKTSPTFNVFLYALGNENYRGGIWQFLTGEKIEVPKIENKSK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcttcttaccctttaccggatggcttctcggacattgatgtgttctctttggga
tcttgtctgctcgtggagggtcttctgggattcttcctgaatgctgtgacagtcgctgct
ttcatcaaaataagagaactgagaacccccagcaatttcctagtctttagcttggcattg
gccgatatgggcatctccgcgaatgcaaccattgccgctttctccagctttctgaggtac
tggccctatggctctgatggctgccagactcatggtttccagggtttcgtgacagctctc
gccagcatccacttcattgctgccatcgcatgggacagataccaccagtactgcacaagg
acaaagctacagtggagcagtgccatcactctgactatcttcatctggctgttcaccgcc
ttctggtccgccatgcccctcatcggctggggagagtatgactacgaacccctcagaacc
tgctgtaccctggactacagcaaaggagacaggaactatgtgtcctacttgatccccatg
gccatattcaacatggccgtccagacttttgttgtcatgtcctcctacaattccatcggc
cagaaattcaagaagaccggaaaccccaggttcaacactgccactcccctgaagacattt
ttgttctgctggggaccctatggagtcctgaccttttacgctgctgttaagaatgccaac
ctggtctctcccaagataaggatgctggctcctattctggcaaagacctctcccacgttc
aacgttttcctgtacgccctgggcaatgagaactacagaggaggcatctggcaattcctc
actggggaaaagattgaagtgcctaaaattgaaaacaagtccaaatga
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