Coregonus clupeaformis (lake whitefish): 121553427
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Entry
121553427 CDS
T08357
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121553427 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121553427 (nvl)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121553427 (nvl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_2
AAA_14
AAA_22
AAA_33
TIP49
NPHP3_N
AAA_28
Mg_chelatase
RNA_helicase
AAA_17
nSTAND3
AAA_18
Rad17
Vps4_C
TsaE
NACHT
IstB_IS21
Zeta_toxin
Viral_helicase1
AAA_3
nSTAND_NTPase5
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
121553427
NCBI-ProteinID:
XP_041722462
LinkDB
All DBs
Position
37:complement(28669364..28679723)
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AA seq
888 aa
AA seq
DB search
MMKNRGGGVDNRLKQRVEQYLSNQSGQYVDITSMAHDLQRLYRMDYGRRNKTAFRIQVEK
VHGVICDESGLNDLENKHLAKRARHSEKDAGDGSSNLDDTTDSDEDLPEQPPINLMNNSL
MSLYKKGNPESGASPRRDQSASDSPAPEAQSTPHSVGTKVSAGGWFIDKGRGLEHDSILI
DLCEEEAASPAGNKQTDVSMLEPEKTPKKGKLKKSKRRKEGASKGNDGDIEASIMNKKAR
TKSIELQYSTLKFEDVGGNEDTLTEVCKLLIHMRHPEVYQQLGVVPPRGFLLHGPPGCGK
TLLAQAVAGEMELPMLKVSAPELVSGVSGESEQKLRELFEQAVTSSPCILFIDEIDAITP
KREVASKDMERRIVAQLLTCMDDLNSLAVTAQVMVIGATNRPDSLDPALRRAGRFDKEIC
LGIPDEAARLRILKTLCRKLKLPEDFDYRQLARLTPGYVGADLMALCREAAMSAVNRVLL
ERQDKNQGLVPMAEESAESEVPQGAGPLPQGPERCQASADTERQEMTDLSHVPQGDQQHP
LAIETTFRGELCRLLSLLKSSESLSEEQLAGLCILMSDFLGSLASVQPSAKREGFATVPD
VTWEDVGALHDIREELTMAILAPVRSPEQFKALGLSAPAGVLLAGPPGCGKTLLAKAVAN
ESGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGA
SVRVVNQLLTEMDGLETRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPPSDRHAI
LLTITKGGSKPHLEQDVSLEEIAHDMRSDCFTGADLSALVREASVNALRAYLLTQPNPSY
TGHSYSNGPVADIRVSKQNFEDAFKKVRPSVSKKDQRMYEQLKESLTR
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaacagaggtggcggggtggacaaccgactcaaacagagagttgagcagtat
ttgagtaaccagagcggtcagtatgttgacattacttcaatggcacatgatcttcagaga
ctctacagaatggactatggcaggcgaaacaagactgcattcaggattcaggtggaaaaa
gtccatggcgtgatatgcgatgaatctggactgaacgatctggagaacaagcacttggcc
aagagagccagacacagtgagaaggatgctggggatggcagcagtaacttggatgacact
actgatagtgatgaggaccttcccgaacaaccgcccatcaacctcatgaataactccctg
atgtccctgtacaagaaggggaacccagagagtggggcatctcccaggagggaccagtct
gcatcagacagccctgcccccgaggctcagtccacccctcacagtgttggcacaaaggtg
tctgcagggggctggttcatagacaagggcagaggcctggagcatgacagcatcctcatt
gacctgtgtgaagaggaggcagccagtcctgcaggaaataagcagacagatgtctcaatg
cttgagcctgagaagacaccaaaaaaaggcaaattgaaaaaatctaaacggcggaaagag
ggagcgtcaaagggcaacgatggtgacatcgaggccagtatcatgaacaagaaagcgagg
acaaaatccattgaactacagtattctacattaaagtttgaagatgttggaggcaatgag
gacacgttaacggaggtgtgtaagctgctgatccatatgcgtcatccagaggtgtaccag
cagttgggggtggtccctccacgggggttcctgcttcatggcccccctggctgtgggaaa
accctgctggcccaggctgtggctggggagatggagctgcccatgctgaaggtgtcggcg
ccagagctggtgtctggggtgtcaggggaatctgagcagaagctgagagagctgtttgag
caggctgtgaccagctccccttgcatcctgttcattgatgagattgatgccatcactcct
aagagagaggtggcctccaaggacatggagagacggattgttgctcagctgctcacctgc
atggatgacctgaactctttagctgtcacagcccaggtgatggtcattggtgccaccaac
cggccagactctctggacccagcgctgcgccgtgctggacgctttgacaaagaaatctgt
ctggggatacctgatgaagcagctcgtctcagaattctgaagaccctttgtcggaagctg
aagctccctgaggactttgactaccggcagctggcgcgtcttaccccggggtacgtggga
gctgacctcatggcgctgtgccgcgaggccgccatgagtgccgtcaacagggtcctgctg
gagaggcaggacaagaaccaggggctggtccccatggcggaggagagcgcagagtcagag
gtgcctcagggcgcaggtcctctcccacagggcccagagagatgccaggcctcagcagac
acagagcgccaggagatgacagaccttagccacgtaccacagggagaccagcagcatcct
ctggccattgagacaaccttcaggggggagctgtgtcgcctgctgtctctgctgaagagc
agtgagtcgctgtctgaggagcagcttgctggcctgtgcatcctcatgtcagacttcctg
ggctccctggccagtgtgcaaccctctgccaagcgtgaaggcttcgccacggtgccagac
gtcacctgggaggacgtgggggccctgcatgacatccgcgaagagctcaccatggccatc
ctggcccctgtgcgttctcctgagcagttcaaagccctgggtctcagtgctcctgcaggg
gtgttgctagctgggcctccaggttgtggaaagaccctgctggccaaggctgtggccaat
gagtcaggacttaacttcatctctgtcaaggggccagagctgctgaacatgtatgtggga
gagagcgagcgggccgtgcgacaggtgttccagagaggaaggaactctgccccttgtgtc
atatttttcgacgagatcgatgcactgtgcccccgccgctccgggcatgagtctggagcc
agtgtccgtgtggtcaaccagctgcttactgagatggatggactggagacccggcggcag
gtcttcatcatggctgctaccaatagaccagatatcattgaccctgctgtgctgagacca
ggccgtctggacaagaccctgtatgtgggcctcccacctccatcagaccgacacgccatc
ttactcaccatcaccaaggggggcagtaagcctcatctggagcaggatgtgagtctggag
gagatagcccatgacatgcgcagtgactgtttcactggggcagacctgtctgcgttggtg
agggaagcctctgtcaatgctctgagagcctacctcctgacccaacccaacccatcttac
acaggtcacagctactccaacggccctgtggccgacatcagggtcagcaagcagaacttt
gaggatgccttcaagaaagtacggccgtctgtgtctaaaaaggaccagcgtatgtacgag
cagctaaaggaatctcttacaaggtga
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