Coregonus clupeaformis (lake whitefish): 121553473
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Entry
121553473 CDS
T08357
Name
(RefSeq) calcium-activated potassium channel subunit beta-4
KO
K04941
potassium large conductance calcium-activated channel subfamily M beta member 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121553473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121553473
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121553473
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Gene cluster
GFIT
Motif
Pfam:
CaKB
Motif
Other DBs
NCBI-GeneID:
121553473
NCBI-ProteinID:
XP_041722537
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Position
4:19853919..19939187
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AA seq
250 aa
AA seq
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MAKMRVSYEYSEAEDKSIRLGLFLIVCGILSLFILGFCWLSPTLQSMQSKPANCTVVSVL
RPEEMFECVFTCGADCKGTSLYPCLQIFVNNSESNSVALLHFDEQQLVLNPKCSYVPPCE
RDNQKNRDNVLWWEDYWTKEVSSQSFTCFFNQQRRPDDVLWRRSHDASVLLHCVLWPMVS
LLVGTLIVLLTVCARSLAVRAEAIQKRKCSYEPADNSEQGKTPPNTNTASSRTLPMFAVP
VRRRDREQEH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatgagggtgtcctacgagtactcggaggcggaggataagagtatccgacta
ggactgttcctcatcgtctgtggcatcctgtccctctttatcctcgggttctgctggctc
agtcccactctacagagcatgcagagcaaaccggcaaactgcaccgtggtgtccgtgctc
agaccggaggagatgttcgagtgcgtgttcacgtgcggggccgactgcaaggggacgtcg
ctgtatccgtgtctgcagatattcgtcaataattccgagtcgaactccgtggctctgctg
cactttgacgaacagcaactggtgctgaaccctaagtgctcatatgttcctccatgtgag
agggacaaccagaagaacagggacaatgttctgtggtgggaggactactggactaaagag
gtcagctcccaatccttcacctgcttcttcaaccagcagagaaggcctgacgacgtactg
tggcggcgctcccacgacgccagcgtcctcctccactgtgtcctgtggcccatggtgagt
ctgctggtgggcaccctcatcgtccttctcaccgtgtgtgcccgtagcctggccgtgcgc
gccgaggccatccagaagaggaagtgctcgtacgagccggcagacaactccgagcagggc
aagacgccgcccaacaccaacaccgcctcctcccggaccctgccgatgttcgctgtccct
gtccgacgcagagaccgggaacaggaacactag
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