Coregonus clupeaformis (lake whitefish): 121553475
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Entry
121553475 CDS
T08357
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03010
Ribosome
cclu04120
Ubiquitin mediated proteolysis
cclu04137
Mitophagy - animal
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
121553475
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121553475
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121553475
04137 Mitophagy - animal
121553475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cclu03011
]
121553475
04121 Ubiquitin system [BR:
cclu04121
]
121553475
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121553475
Ribosome [BR:
cclu03011
]
Ribosomal proteins
Eukaryotes
Small subunit
121553475
Archaea
121553475
Ubiquitin system [BR:
cclu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
121553475
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121553475
Exosomal proteins of colorectal cancer cells
121553475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
121553475
NCBI-ProteinID:
XP_041722535
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gataccattgaaaatgtcaaggctaagattcaagacaaagaaggtatccctcctgatcag
cagaggttgatcttcgctggtaagcagctggaggatggacgcacactgtctgactacaac
attcagaaggagtccactctgcacttggtgctgagactgcgtgggggtgccaagaagagg
aagaagaagtcctacaccactcccaagaagaacaagcacaagaggaagaaggtcaagctc
gcagttctcaagtactacaaggttgacgaaaacggaaagatccaccgtctgcgtcgtgag
tgcccagctgatgagtgtggagctggcgtgtttatggccagccacttcgataggcactac
tgtggaaagtgctgcctcacctactgcttcaacaaacccgaggacaagtaa
DBGET
integrated database retrieval system
