KEGG   Coregonus clupeaformis (lake whitefish): 121553532
Entry
121553532         CDS       T08357                                 
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
  KO
K24223  cilia- and flagella-associated protein 43
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cclu03037]
    121553532 (cfap43)
Cilium and associated proteins [BR:cclu03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   121553532 (cfap43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_THOC3 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st WDR55 WD40_Prp19 Beta-prop_EML WD40 Beta-prop_HPS5 Beta-prop_WDR3_2nd CFAP43_N Beta-prop_ACSF4 Beta-prop_Aladin CFAP251_N Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_VPS8
Other DBs
NCBI-GeneID: 121553532
NCBI-ProteinID: XP_041722645
LinkDB
Position
37
AA seq 1671 aa
MDVLGNLEVRWTQGLTSQNVEFVDKKTACYICGNYIVFLNIETKMRSVLQCPGRGIGAFT
ANGHCRTLAFSNHKLNPSIFVYNYPELMQKNELKGTAHIDYTSLALSDAGPYLACCSSIP
DHTITVWNWETGDPICNQPQAGKDITSLVFNPMNWLQICALSASSSVTVWNIEKSDRFHI
MKPSVIDLPATDGCLVEREINPSHVPTGILTYFGPQMPTSAIAGLAEEKAETFVPKEHIK
TRLSPSTICWTASSELYVGCQEGHLLQVDPDSLAVSVLFNPSAADDIPGFQQGSFQSLAL
HKDGLFVSGKENVLRCLKIKGNQVEVTQTWTLEEPATTIIYSPDYETLLLTSSTGRIYRY
KRSQCEKVVKVLDVLSGDFVAAASLYTDNNLCVSVRDSGELQLWSLDAGFCVGSISLQVK
VTSLACCPIAQYVAVGTVSGHVLFIELTREQQPRLVHRVHLYYTPVDHLLFDQGGNFLIT
GASDANIYVLNARASRVFEVIGYTGAKGAIVSLSTQYSRDIKQVKLLALCAGEKDIGRGE
GSLLTLLTLPVQELTGAGVCADLRGCLSNNVLQRCTYEVPHALSSSALGANKIFGYCQKR
KTLQRFQLPESTERSSDQEVVQLTPEKEVDGHPMGPASVLLSPHQSWLASVGQDGLLRIR
EISSLDRYVQMQCHSCWLGGVRTVSFTSDSQTLITTGLKDGSMVCTRLRLKMAGVGKANA
ATQYSQSIAKYQESVMTSENPILSRMADWDPEALSPPGSADLHGAEASDKRQIVDLTEQD
ESSTNLPSATASDSTWLDNKLETVINEEIQQFSQTKKSLRKNIKQLRDTIQAMMRENETL
PDMEKLEQQEFNLDVDEQKRLQAEGEQEVTRVRNEIELENLAKCYLRDVLKRECWDSMKV
KGQAIKAFHSEHEVKNYPMKERTQQELDELHRVESVRKIERADSNLQQEILEKKSKTTTE
EEEEEEGREMESASLTGSLSAQYGGSNPYLYNQFNLHIREQKINQITLLQDVIYKVKTAF
NTDFKGVHKQKEQEINRVKDKNRRIMEIMSELDLKRKLWEPSLSDNEQPERALSVEDSEI
QFEKYLTPEQRKKEEEKRKAEEQRRQAAKSDNIRERALDEMMGGVLELKKEDILRMDVPQ
PEFIVSKPDIQWTEEEKKIYKEYEKKAKELSEEQEKYRKTLEAEMKKLQTSIMDTTQGFD
ETLTKLFERKVKSEMVIYQEELKITNLVHSILIEEEVCNRERELSLKLEKKRVYKNEIGE
ELKKHKEDVEMFRETYDNVVAEDKLLDRGFRKEFFDVPGHVVDQLYKLYKRRPSTLLPRV
QRMRTQADNSTSPFKEQPLPGPVAAEGLCQMMKAMEELDAPENMPESLDPSVWERFCLAR
RAKVESEQQVKVKALTLAEMQAFLQKRTDEDESARLEMKSLMDDINGLREEKMRFRLDIM
VQILIKQGQVEVENGDFIADYSDSLLLHKSVVEDLNGTIRALGEQKIASMVECKDFRKGI
IQQEWEHKRMRMQKEDLNNKARDIQMLRVSQELQEYLSETDHDNRMSKQVSTLEKTITLQ
EKTHQKNVLKCKKLIKQLNRQAAMKAAKNTALDEQLTNMQVTVAERRHIYEAIAMEENQE
SEAEERYQEIIQRKKLVDLARAQAEEVAILRAEVERMRMKSFPTLAQLKHN
NT seq 5016 nt   +upstreamnt  +downstreamnt
atggatgtattgggaaatttagaagtcaggtggactcagggtttgacaagccaaaatgtt
gaatttgttgacaagaaaacagcctgctacatttgtggaaattacatagttttcctgaat
atagagacgaaaatgagaagtgtgctgcagtgtcctggtcgaggtattggtgccttcaca
gcaaatggacattgcaggacacttgcattctccaaccataaactaaatccctccatattt
gtgtacaactaccctgaactaatgcagaaaaatgaactaaagggaacagcccatatagac
tacacatctctggcactaagtgatgctggtccttatttggcctgctgctcatcaatacca
gaccataccataacagtatggaactgggaaactggggatccaatttgtaaccaaccacag
gctggaaaagacatcacctctttagtatttaacccaatgaactggctccagatttgcgct
ttgagtgcatcgtcatccgttacagtttggaacattgagaagagtgacagatttcatata
atgaaaccaagtgtgatagatctccctgcgactgatggctgtctggttgagagggagatt
aacccgtctcatgtccccactggaatactcacctacttcggacctcagatgcccacctca
gccatcgcaggacttgcagaagaaaaggcagaaacttttgtgcccaaagagcacatcaaa
accaggctaagccctagcaccatctgctggacagcctcatcagagctctatgtgggctgt
caggaaggccacctgctgcaggttgacccagactctctggctgtctctgtcctcttcaac
ccctcagctgcagatgacattcctgggttccagcagggtagcttccagagcttagccctg
cacaaggatggactgtttgtgtcaggaaaggagaatgtgctacgctgcttgaaaattaag
gggaaccaagtggaggttacacaaacttggacattggaggaaccagccacaaccataata
tattctccagactatgaaacactgctgttaacttccagtacagggcgcatctacaggtat
aaacgatcccagtgtgagaaggtggtgaaagtcctggacgttctcagtggagactttgtg
gcagcagcttcactgtacaccgataataatttatgtgtgtcagtgagggactcaggagag
ttgcagctgtggtctctagatgctggcttctgcgtcggctctatatctcttcaagtaaag
gtgaccagtttggcctgctgtccgattgctcaatatgttgccgtgggaacagtgtcgggg
catgtcctgttcattgagctgaccagggagcagcagccccgtctggtgcacagggttcat
ctctactacactcctgtggaccacctactttttgatcaaggaggaaacttccttatcact
ggtgcctcggatgcaaatatatatgtattgaatgcaagggcttccagagtgtttgaggta
atcggatacacaggtgctaaaggagccatcgtgtccctgtccacccagtacagccgggac
attaagcaggtcaaactgctggctctgtgtgctggagagaaggacataggccggggggag
ggcagtctgcttacactgctcactctgcctgtgcaggagctcacaggggcaggagtgtgt
gcagacctgagaggatgtctgtccaataatgtcctacagaggtgcacatatgaggtccct
cacgcactcagctcctctgccctgggagccaataagatctttggctactgccaaaagagg
aaaactctccagagattccagctacctgagagcacagaaaggtcctctgaccaggaagtg
gtccagttgaccccagagaaggaggtggatggtcaccctatgggccccgcctccgtcctc
ctgtcgccccaccagtcttggctggcctcagtgggccaagacggactgctgcgcatccgg
gagatctccagtctggaccgatatgttcagatgcagtgccactcgtgttggctgggaggg
gtgaggacagtgtcctttacctcagacagtcagacattgatcactacaggcctgaaagac
ggctctatggtctgtacaagactaaggctgaaaatggccggtgttggcaaagcgaatgca
gcgacacagtacagccagtctatagccaaataccaggagagtgtgatgacatcagagaac
cctattctcagtaggatggctgactgggacccagaggccctgtcccctcctgggtcagca
gatctacatggagcagaggccagtgataagcgacagatagttgatttgacggaacaggat
gagagctccaccaacctaccctcagccacagcctcagactccacctggctggacaacaag
ctggaaacggttatcaatgaggagatccagcagttttcacagacgaagaaaagcctgagg
aaaaatatcaaacagttgcgtgacacaatccaggcgatgatgcgtgagaacgagacgctg
cctgacatggagaagctggagcagcaggagttcaacctggatgtagatgagcaaaagaga
ctgcaggctgagggggagcaggaggtcaccagggtccgaaatgagattgagttggagaac
ctagccaagtgctacctgcgtgatgtccttaagagagaatgctgggattccatgaaggtc
aaagggcaagctatcaaggccttccactctgaacacgaggtgaagaactaccccatgaag
gagcggacacagcaggagctggatgaacttcatcgagtggagagtgtgaggaagattgaa
cgggctgacagtaatctccagcaggagattctagagaagaagagcaagaccacgacggaa
gaagaggaggaggaggaaggccgtgagatggagagtgcttccctcacaggtagcctcagt
gcccagtatggaggctcaaacccctacctctacaatcagttcaacctgcatatcagagag
cagaagatcaaccagatcactttgctacaggatgtgatctacaaagtgaagacagccttt
aacacagactttaagggggtgcacaagcagaaggagcaggagatcaaccgagtgaaagat
aagaatcgacgcatcatggagatcatgtcagagctggacctgaagaggaagctgtgggag
cccagcctgtctgacaacgagcagccagagagggcactgtctgtggaggactctgagatt
caatttgaaaagtacctcaccccagagcagagaaaaaaagaggaggagaagaggaaagcg
gaggaacaaagacggcaggcggccaagagtgacaatatcagagagagagctctggatgaa
atgatgggtggagtactcgagctaaaaaaagaggacatcttgagaatggacgtgcctcag
cctgagttcattgtatccaaaccggacattcagtggacagaggaagagaaaaagatctat
aaagagtatgagaagaaagccaaagaactgagcgaggaacaggagaagtacagaaagact
ctggaagctgaaatgaagaaactacagacgtccatcatggacaccactcaggggtttgat
gaaaccttgaccaagctctttgagaggaaggtgaaatctgagatggttatataccaggaa
gagctcaagattaccaatctagttcactccattctgatagaggaggaggtttgcaataga
gagagagagctcagcctcaagctagaaaaaaaaagggtctacaagaatgagattggagaa
gagcttaagaagcacaaagaggatgtagaaatgttccgggagacctacgacaatgttgtg
gccgaggacaaacttcttgacaggggattcaggaaggagttctttgatgtcccaggccat
gttgttgatcagctgtacaagctatacaagcgcagacccagtacactcttgcccagggtc
cagaggatgaggacccaggcagacaacagtaccagcccctttaaagagcagcccctgccg
ggcccagtggcagcagagggtctctgtcagatgatgaaggccatggaggagctggacgct
ccagagaacatgcctgaaagcctagacccgtctgtgtgggagaggttctgcctggcccgc
agagccaaagttgagagtgagcagcaggtgaaagttaaggctttgactctggctgaaatg
caagcttttctgcagaagaggaccgatgaggatgagagtgcaagactggaaatgaaaagt
ctcatggatgatatcaatgggctacgagaggagaagatgcgtttccgcctggacataatg
gttcagatcctgatcaagcagggccaggtggaggtggagaatggagacttcattgctgac
tactctgactctctgctgctccataagagtgtggtggaggacctcaacgggaccatcagg
gctctgggagagcagaagatagccagcatggtggagtgcaaggacttccgtaagggcatc
atccagcaggagtgggagcacaagaggatgaggatgcagaaggaggacctgaacaacaaa
gccagggacatccagatgctgcgcgtctctcaggagctgcaggagtatctcagtgagacg
gatcatgacaaccgcatgtcaaagcaggtttcaactctggagaaaacaataacattacag
gaaaagactcaccaaaagaatgtgctgaaatgtaagaagttgatcaagcagctgaacaga
caggcagcaatgaaggcagcgaagaatactgctctggatgagcagctgaccaacatgcaa
gtgactgtggctgagaggagacacatctatgaagccatagccatggaggagaaccaggag
agtgaggcagaggagaggtaccaggagatcatccagaggaagaagctggtggatctagcc
agggcccaggctgaggaggtggctatcctcagggcagaggtggaacgcatgaggatgaag
tccttccccactctcgctcagctaaaacataactga

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